Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1338 ATGGGGCATTGTTGCAGCAAGAACGTTTCTGCCGTCAACAGTGAAGCCGTTACCGCCGATCACCGCGTCAAATCGCCTCTTCCGGCGGCATCGCCACCGCCTTCTGGGAACTCAGTGTCAGGAGCTGGCGATGCAAACCCTGGTAGGTATACTCCCGCCAACTCCTTCTCCACTAGTCCCTTCACCAGCCCCCTCCCGCCTGGGGTCGCGCCGTCGCCGTCGCCGGCCAGAACTCCGGGCAGGAAGTTCAGATGGCCTCTTCCGCCGCCTTCTCCGGCGAAGCCGATCATGGCGGCAATATTGAGACGGCAGGGGAAGCAGAAGCCAAAGGACGGGCCGATACCAGAGGAGCAGAGCGAAGGTGGAGAGGGAGAGAGGTCGCTGGATAAGAGCTTCGGATATGCGAAGAATCTTGGGGCGAAGTATGAGCTGGGAAAAGAGGTGGGTCGCGGACATTTTGGTCATACTTGCTGGGCCAAAGCAAAGAAGGGAGACCTCAAGGGACAATCGGTGGCGGTGAAAATCATATCGAAAGCCAAGATGACAACAGCAATAGCAATTGAAGATGTAAGGAGGGAGGTGAAGATGTTGAAAGCCTTATCTGGACATAATAATTTGGTCAAATTTCATGATGTATTTGAGGATGCCAATAACGTCTACATAGTGATGGAATTATGTGAGGGTGGAGAACTACTTGACAGAATTCTTTCCAGAGGTGGAAGATACACTGAGGATGATGCCAAAGCTATTCTTGTACAAATTCTAGATGTAGTTGCCTTTTGTCATCTTCAAGGAGTCGTTCACCGTGATCTAAAACCAGAGaattttctttttgtctcaAAAGATGAGGATTCTTTGATGAAGGTTATTGATTTTGGTTTATCTGACTTTGTAAGGCCAGATCAACGCCTCAATGATATAGTTGGCAGTGCCTACTATGTTGCACCTGAAGTGCTCCATAGATCCTACAGTGTTGAAGCTGACTTATGGAGCATTGGagttataacatatatattgttATGTGGAAGCAGACCATTCTGGGCACGCACTGAATCAGGAATCTTCCGATCTGTGCTAAGAGCTAATCCTAACTTTGATGATTCACCTTGGCCGTCAATATCACCAGAAGCTAAAGACTTTGTAAAGAGGCTTTTGAACAAGGACCATAGAAAAAGGATGACTGCTGCCCAAGCTCTAATTCATCCATGGTTGAGAAATGAAAATCGTGCTATTCCTTTGGACATTTTAATCTTCAAGTTAGTGAAAGCATATGTGCGTGCCACACCTTTCAAACGTGCAGCTTTGAAGGCTCTCTCAAAAGCATTGACAGAAGATGAGCTCATCTACCTAAGAGCACAGTTTAGCCTCTTAGAACCAAATAATGGTTGTGTATCCCTTGAAAATTTTAGAGAGGCTCTCGTGAAAAATGCCACTGATACCATGAAGGAATCAAGGGTTCCGGACATTTTAAATATGATGGAGCCACTGGCTTATAAAAAAATGGATTTCGAAGAGTTCTGTGCTGCTGCAATCAGTGTATACCAGCTCGAGGTTCACCCAGAATGGGAGACAATTTCAACCAATGCTTTTGATCATTTTGAGCGGGAAGGAAACAGAATCATTGCAGTTGAGGAGTTAGCGCAGGAGATGAATCTGGGTCCTTCAGCTTACTCCGTACTAGGTGATTGGGTCAGGAAATCTGATGGAAAACTAAGCTTCAGTGGATATCTGAAGTATTTACATGGTGTGACAGTTCGTAGTTCAAGTACAAGACCTCGACAGCCAGTATGA 1791 0.4578 MGHCCSKNVSAVNSEAVTADHRVKSPLPAASPPPSGNSVSGAGDANPGRYTPANSFSTSPFTSPLPPGVAPSPSPARTPGRKFRWPLPPPSPAKPIMAAILRRQGKQKPKDGPIPEEQSEGGEGERSLDKSFGYAKNLGAKYELGKEVGRGHFGHTCWAKAKKGDLKGQSVAVKIISKAKMTTAIAIEDVRREVKMLKALSGHNNLVKFHDVFEDANNVYIVMELCEGGELLDRILSRGGRYTEDDAKAILVQILDVVAFCHLQGVVHRDLKPENFLFVSKDEDSLMKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYSVEADLWSIGVITYILLCGSRPFWARTESGIFRSVLRANPNFDDSPWPSISPEAKDFVKRLLNKDHRKRMTAAQALIHPWLRNENRAIPLDILIFKLVKAYVRATPFKRAALKALSKALTEDELIYLRAQFSLLEPNNGCVSLENFREALVKNATDTMKESRVPDILNMMEPLAYKKMDFEEFCAAAISVYQLEVHPEWETISTNAFDHFEREGNRIIAVEELAQEMNLGPSAYSVLGDWVRKSDGKLSFSGYLKYLHGVTVRSSSTRPRQPV 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1338 596 Pfam Protein kinase domain 142 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1338 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Sto5g1338 596 SUPERFAMILY Protein kinase-like (PK-like) 141 424 IPR011009 -
Sto5g1338 596 SUPERFAMILY EF-hand 437 582 IPR011992 -
Sto5g1338 596 Gene3D Phosphorylase Kinase; domain 1 135 231 - -
Sto5g1338 596 Gene3D - 443 511 - -
Sto5g1338 596 MobiDBLite consensus disorder prediction 15 129 - -
Sto5g1338 596 Gene3D - 421 577 - -
Sto5g1338 596 MobiDBLite consensus disorder prediction 34 63 - -
Sto5g1338 596 PANTHER CDPK-RELATED KINASE 3-LIKE ISOFORM X1 54 587 - -
Sto5g1338 596 ProSiteProfiles Protein kinase domain profile. 142 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1338 596 PANTHER SERINE/THREONINE-PROTEIN KINASE 54 587 - -
Sto5g1338 596 ProSitePatterns Protein kinases ATP-binding region signature. 148 174 IPR017441 GO:0005524
Sto5g1338 596 SMART serkin_6 142 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1338 596 Gene3D Transferase(Phosphotransferase) domain 1 232 418 - -
Sto5g1338 596 MobiDBLite consensus disorder prediction 104 129 - -
Sto5g1338 596 CDD STKc_CAMK 141 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1338 Sto-Chr5 9145316 9152818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1338 1 587 EF-hand Containing Proteins AT3G50530 59.248 0.0 725
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto5g1338 Pkinase 6.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1338 - - var:108331904 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2698 9 28992402 28996518 Sto5g1338 5 9145316 9152818 ECH
Sto5g1338 5 9145316 9152818 Sto5g1338 5 9145316 9152818 ECH