Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1334 ATGATGATGGGGGATGATGATATTGATGAGTATTATATTCAAGCATCAGAAGAAAGCTTCACATGCTCAGAGCCACCTCAAAGTCCAAGGaaagaaaacaacaaaaatgtgggaagcaagaagaagaagttcAGTGATGAACAAATCAGATCACTGGAGTGTATATTTGAGTCAGAGTCAAAGCCTGAAGCAAGGAAGAAGATGCAAGTAGCAAGAGATCTTGGGTTGCAGCCTCGCCAAGTTGCCATATGGTTCCAGAACAGAAGAGCAAGATGGAAATCTAAGAGGATAGAACAAGATTACAGGAAGCTCAGAGATGAGTATGACAGTTTAGCTTCCAGGTTTGAGTCcctaaagaaagagaaagagtcaTTGCAAGTACAGttGCAGGAGCTAAATGATCTATTAATGGAGACATCCCACCATGAGGGTTTGGAGGACAGGGAAGAAGGCATGCATTTACAAGATCAAAGTGAAATGAAGAAGAGTGGGTGTTGTGAGGACACAGGAGGATACCAAGCTTGCTCTCTCGGCCCTTCCAATCTGAACCCTTCACTGTTCAACCCCATCAAATTCCCTCCCATCTGGCCAAAACCAAAGGTGAAGATGGGTCCACTGAGTGTGTCTCCAATGGGGTTTGGAACGTGGGCATGGGGTAATCAATTCCTTTGGGGTTACCAAGAATCGATGGACACTGAGCTTCAACAAATCTTCAATATGGCTGTGGACAATGGAGTCAATCTCTTTGATACTGCTGATTCTTATGGCACAGGGAGGTTGAATGGACAGAGCGAGAAGCTTCTGGGAAGGTTCATTCGAGAATTTCAAGAGCAAAAGGGGGGCCGGGGTGAAATAGtaattgcaacaaagtttgcAGCATATCCATGGCGCCTTACACCAAATCAATTTGTGAATGCTTGCAGGGCATCTCTAGATCGCATGCAGATTGAGCAAATTGGGATTGGACAACTTCATTGGTCAACTGCAAATTATGCTCCTTTGCAGGAGCTAGCTCTTTGGGATGGTCTAGTGGCAATGTATGAGAAGggtttagttcgAGCTGTTGGAGTGAGCAATTATGGACCAAAACAGCTTTTGAAGATCCATGATTATCTGAAAGCCCGAGGAGTTCCCTTGTGCTCAGCTCAGGTACAATTTTCTTTGATAAGCATGGGTAAAGATCAGTTAGAGATCAAGAATATATGTGATTCTCTAGGTATTCGTTTGATTGCTTATAGTCCTTTAGGACTTGGAATGCTTACTGGGAAATATTCACCATCCAAACTTCCAAAGGGGCCTCGGGGCTTACTGTTTAGGCAAATCCTTCCTGGACTGGAGCCCTTATTGGGTTCATTGAGAGAGATTGCAAGCAAACGTCGCAAAAGCATGTCACAAGTTGCCATAAATTGGTGTATAAGCAAGGGTACAGTTCCAATACCAGGAGTGAAGTCAATAAAACAAGCAGAAGAGAATTTGGGTGCTCTTGGATGGCGCCTCTCTTCAGAGGAGTTGCTTCAGTTAGAGAATGCAGCAGAGGAGTCACCCACGAGAATGATACAGAACATTTTCCAAACCAAGTAA 1581 0.4181 MMMGDDDIDEYYIQASEESFTCSEPPQSPRKENNKNVGSKKKKFSDEQIRSLECIFESESKPEARKKMQVARDLGLQPRQVAIWFQNRRARWKSKRIEQDYRKLRDEYDSLASRFESLKKEKESLQVQLQELNDLLMETSHHEGLEDREEGMHLQDQSEMKKSGCCEDTGGYQACSLGPSNLNPSLFNPIKFPPIWPKPKVKMGPLSVSPMGFGTWAWGNQFLWGYQESMDTELQQIFNMAVDNGVNLFDTADSYGTGRLNGQSEKLLGRFIREFQEQKGGRGEIVIATKFAAYPWRLTPNQFVNACRASLDRMQIEQIGIGQLHWSTANYAPLQELALWDGLVAMYEKGLVRAVGVSNYGPKQLLKIHDYLKARGVPLCSAQVQFSLISMGKDQLEIKNICDSLGIRLIAYSPLGLGMLTGKYSPSKLPKGPRGLLFRQILPGLEPLLGSLREIASKRRKSMSQVAINWCISKGTVPIPGVKSIKQAEENLGALGWRLSSEELLQLENAAEESPTRMIQNIFQTK 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1334 526 MobiDBLite consensus disorder prediction 18 33 - -
Sto5g1334 526 Pfam Homeodomain 40 93 IPR001356 GO:0003677
Sto5g1334 526 SMART HOX_1 38 99 IPR001356 GO:0003677
Sto5g1334 526 Gene3D - 20 100 - -
Sto5g1334 526 PANTHER AFLATOXIN B1 ALDEHYDE REDUCTASE 190 519 - -
Sto5g1334 526 Coils Coil 87 138 - -
Sto5g1334 526 Pfam Homeobox associated leucine zipper 95 136 IPR003106 GO:0006355|GO:0043565
Sto5g1334 526 ProSitePatterns 'Homeobox' domain signature. 70 93 IPR017970 GO:0000981|GO:0006355
Sto5g1334 526 CDD AKR_AtPLR-like 208 508 - -
Sto5g1334 526 CDD homeodomain 40 96 IPR001356 GO:0003677
Sto5g1334 526 PANTHER PYRIDOXAL REDUCTASE, CHLOROPLASTIC 190 519 - -
Sto5g1334 526 PRINTS Aldo-keto reductase signature 241 265 IPR020471 GO:0016491
Sto5g1334 526 PRINTS Aldo-keto reductase signature 343 360 IPR020471 GO:0016491
Sto5g1334 526 SUPERFAMILY NAD(P)-linked oxidoreductase 206 512 IPR036812 -
Sto5g1334 526 Pfam Aldo/keto reductase family 210 510 IPR023210 -
Sto5g1334 526 MobiDBLite consensus disorder prediction 18 47 - -
Sto5g1334 526 ProSiteProfiles 'Homeobox' domain profile. 35 95 IPR001356 GO:0003677
Sto5g1334 526 ProSitePatterns Aldo/keto reductase family signature 2. 343 360 IPR018170 GO:0016491
Sto5g1334 526 SUPERFAMILY Homeodomain-like 24 95 IPR009057 -
Sto5g1334 526 Gene3D - 201 516 IPR036812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1334 Sto-Chr5 9109435 9114527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1334 43 159 Homeobox Transcription Factor Family AT3G61890 57.500 9.25e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Sto5g1334 Aldo_ket_red 4.5e-64 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1334 K05275 - gmx:100791681 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1334 5 9109435 9114527 Sto5g1334 5 9109435 9114527 ECH