Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1321 ATGGCGGACTCGTCGGAGCGGTTCGTGCAGGAGTTGGTTTTGATCGCATTCAGCGCCACTTTGAGTTACTTGGTCATGGGTGCGAGCATCCGGAATATTGACCCGAACCGCGAGGCGTCGAAGAAGGCTGTTGAGCACAAGAAAGAGATAGCTAAGCGTTTGGGTCGTCCTGTCATTGACACAAACTCTTACGAGGATGTTATAGCCTGTGATGTGATAAATCCTGACAACACCGAAGTGGAGTTTGACTCCGTTGGTGGACTGGAAAAGATCAAGCAAGCTTTGTATGAACTTGTTATACTGCCTTTAAAAAGACCAGACCTGTTTTCTCATGGCAAGCTTCTTGGGCCTCAAAAAGGAGTACTGTTGTATGGTCCACCTGGGACTGGGAAAACTATGCTTGCCAAAGCTATTGCAAAGGAGTCTGGAGcagtttttattaatgtgaagaTGTCAAATCTGATGAGCAAGTGGCTTGGTGATGCCCAAAAGCTTGTGGCGGCTGTATTTAGCCTGGCTCGTAAGCTTCAGCCGGCTATTATCTTCATTGATGAGGTTGACAGTTTTTTGGGTCATCGTCGTGCTACAGATCATGAGGCAATTTTAACCATGAAAACTGAATTCATGGCCTTGTGGGATGGACTTACAACAGACCAAAATGCTCGAGTTATGGTCCTAGCAGCAACTAACCGTCCTTCTGAACTTGATGAAGCAATACTTCGGCGTCTTCCTCAAGCCTTTGAAGTTGGGGTTCCAGATCGATGGGAGAGGGTTGAGATATTAAAGATTATCTTGAAGGGTGAAAGTGTTGATGAGAACATTGACTTTGATCATATAGCTGGTCTATGTGAGGGTTATACTGGTTCAGATTTGTTTGAAGTCTGCAAGAAGGCAGCATATTTTCCTATTAGAGACCTACtagatgaagagaaaaaaggGAAAACGTCTCCTGAACCAAGGCCATTGTGGCAGTCAGATTTAGAGAAGGTCCTTGCCACTTCAAAGAAAACGAAGGTTGCTGCAGGTGAATACAGGGCACGATACTCAGGATCCTTGAAGATCCTGGCCACCTTTAGTCTTTAG 1083 0.4423 MADSSERFVQELVLIAFSATLSYLVMGASIRNIDPNREASKKAVEHKKEIAKRLGRPVIDTNSYEDVIACDVINPDNTEVEFDSVGGLEKIKQALYELVILPLKRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVKMSNLMSKWLGDAQKLVAAVFSLARKLQPAIIFIDEVDSFLGHRRATDHEAILTMKTEFMALWDGLTTDQNARVMVLAATNRPSELDEAILRRLPQAFEVGVPDRWERVEILKIILKGESVDENIDFDHIAGLCEGYTGSDLFEVCKKAAYFPIRDLLDEEKKGKTSPEPRPLWQSDLEKVLATSKKTKVAAGEYRARYSGSLKILATFSL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1321 360 Gene3D - 252 332 - -
Sto5g1321 360 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 309 IPR027417 -
Sto5g1321 360 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 5 343 - -
Sto5g1321 360 Pfam ATPase family associated with various cellular activities (AAA) 121 250 IPR003959 GO:0005524|GO:0016887
Sto5g1321 360 Gene3D - 77 336 IPR027417 -
Sto5g1321 360 Pfam AAA+ lid domain 273 309 IPR041569 -
Sto5g1321 360 CDD AAA 86 250 - -
Sto5g1321 360 SMART AAA_5 117 253 IPR003593 -
Sto5g1321 360 ProSitePatterns AAA-protein family signature. 223 242 IPR003960 GO:0005524|GO:0016887
Sto5g1321 360 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 5 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1321 Sto-Chr5 9027390 9030418 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1321 76 317 Calmodulin-binding Proteins AT3G56690 35.510 2.73e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1321 K22530 - csv:101204071 569.311