Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1291 ATGGATTTCTATTACAGTGATTTTGACTTACCAAACCTCATCGACTCGCATTCACAAGAACCAGACAGAATAATGGAGATTTCTCCATTAGAGGGTAATTCTGAAATGGATGGTTTCTTCCCAATATTTCCATTGCAAAACAACCCATTTTGCTTCAACCAATTCCCCGAACTCGAAAACTTCAGCACAGACTTCACGGCATTGGATTACAATATGCCCCTTCTTTGTGAAGACATTGTGTTCGACCAAAAGCCTCTGAGTCAGAGCATTTTTGTGCCCTCACCGTCCCAGTGTTTCACTGATTTTCCAAAGCTATTAGGGGATGCTTCGTCTAGTTCCATCATGAATATGGGTTTTGGAAGTGGGTTTGGTGGTGGAGGTACTACTTCATGTGTGAAGAAACTAGAGGAGGAGGAGTTGATCAAGTATAGAGAAAGAGACAGGATCATTAACAATGGAAATTTTAGTACTAGGAAGACGAGGACAGCTTCATTGGATTTGGAAGAGATAAGGAAACactttgatgttccaattacCAAAGCAGCCAAAGAATTGAATGTGGGATTGACCCTTTTGAAGAGAAGATGCAGAGAGCTCAACATCACTAGGTGGCCCCACAGGAAAATCAAGAGCCTCCAATCCCTCATAGACAATGAACTGGGGTTGATTGAAGAAGTGGACATGTTGGAGAAGCACAAGAGGCTTGTGGAGAAATTGCCAGATTTAGAGCTAAGCGAGAAGACGAAGAAGCTGAGGCAAGCTTGTTTCAAAGCTAATTACAAGAGGAGAAGATCATTGGCTTATCAGCCTTGA 813 0.4145 MDFYYSDFDLPNLIDSHSQEPDRIMEISPLEGNSEMDGFFPIFPLQNNPFCFNQFPELENFSTDFTALDYNMPLLCEDIVFDQKPLSQSIFVPSPSQCFTDFPKLLGDASSSSIMNMGFGSGFGGGGTTSCVKKLEEEELIKYRERDRIINNGNFSTRKTRTASLDLEEIRKHFDVPITKAAKELNVGLTLLKRRCRELNITRWPHRKIKSLQSLIDNELGLIEEVDMLEKHKRLVEKLPDLELSEKTKKLRQACFKANYKRRRSLAYQP 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1291 270 ProSiteProfiles RWP-RK domain profile. 152 232 IPR003035 -
Sto5g1291 270 PANTHER PROTEIN RKD4 155 265 - -
Sto5g1291 270 Pfam RWP-RK domain 165 212 IPR003035 -
Sto5g1291 270 PANTHER PROTEIN RKD4 155 265 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1291 Sto-Chr5 8805545 8806653 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1291 165 267 AtRKD Transcription Factor Family AT5G53040 67.619 4.70e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Sto5g1291 RWP-RK 5.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1291 - - aprc:113850801 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1291 5 8805545 8806653 Sto5g1291 5 8805545 8806653 ECH