Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1285 ATGGGAAAGAAAGGTGGAGGAGGCGGCTGGTTCTCGTCCGTGAAGAAGGTTTTTAAGTACTCTTCGAAGGACTCGCCGGTGCCGGCGGAGAGGAAGGTGATCGATTCATCTGttcttgtcttttcttctttttcctttttagttTCTGGTGGAAATCTAATGCCAAATAAAGGACAAGCTGCCTGGCCCTTTCTTTCTATACTTAGGACCATGAATCCACTGCATCACAAGGAAAATGAAGAGAAATGGCAGCATGAAGCGCCGGAGGCGGTTTGTTTTGAGCATTTTCCTGCAGAGAGTTCTCCTGATGATATCACCAATGAGGAGAGTACAACATCGACGCCTGTGACTGAAGACAGAAACCACGCCGTCGCCGCTGCCACAGCTGCAGCTGCCGAGGCAGCAGTCGCAGCCGCTCAAGCGGCGGCGAGAGTAGTTAGACTGGCAGGTTATAGGCGTCAATCCGAGGAAGAAAGAGCAGCAATACTCATTCAATCATACTACAGAGGCTACCTAGCTCGACGTGCACGACGTGCTTTGAAGGGATTAGTGAGGTTGCAAGCGCTTGTGAGAGGTCACAATGTGCGGAAGCAAGCTCAAATGACAATGCGTTGTATGCATGCGTTGGTCAGAGTACAGGCAAGAGTGAGAGCTCGCAGAATCCAATTGACCCATCAGAAGCTtcacaaaaatatggaggcCGACCACCAATATTCGAAGCCCACGAGCCCTTTGTTCGAGGATGTTGGGGAAAGTAGGCGTCAAAGCTTCCAGAAAATCCAGGCAAATGACTTGAGGAAACATGAGGCTCTCatggagagggagagagctctTGCTTACGCTTTCAACTATCAGCAACAGCAGAAGCAGTTTCTGCACGCAGACCTGGATGACGATGATATTGGAAAAACCAAGTGGGGTTGGAACTGGCTAGAGCATTGGATGTCATCTCAACCACACCAAGTGAGGAACTCTGGGCCACCTAAGACCCCTTATACGACCCTTCCTGctacaaccaccaccaccactactaCAGATGACATGTCCGAGAAGACAGTAGAAATGGACACTGTGGCACCTCCAAGGTCAAGCAACCTCAAAATGGACCAAATGGGCCAATTCCGTCTTCATGATGATTCAAGTCCAATTGCCAATAGGCAACATCAGCAACAGCACCATGCAAATGTACCTAGCTATATGGCCCCCACACAGTCCGCAAAGGCCAAGGTGCGGGATCAAGGCCCAAAGCCACGTGGCTCATCTGTGCCTCAGTGGAATTCGTCAACAAGGAAGAGCCCTGTTGTTGGGCCGGGCTGTGACTCCTCCGATTCAGGTGGAGGATTCGCGAATTATCAGTTTATGAGGAGCCCAAGCCCCACAATTAATGGGATTCGGCTACAGTCTAGAAGGATGTCAGCTGGAAGCCCAGACTATGTTGGTGTTGATGATTGGGCCCTGCCTCTTGGAGCCCATGGTTGGGTGTGA 1485 0.4788 MGKKGGGGGWFSSVKKVFKYSSKDSPVPAERKVIDSSVLVFSSFSFLVSGGNLMPNKGQAAWPFLSILRTMNPLHHKENEEKWQHEAPEAVCFEHFPAESSPDDITNEESTTSTPVTEDRNHAVAAATAAAAEAAVAAAQAAARVVRLAGYRRQSEEERAAILIQSYYRGYLARRARRALKGLVRLQALVRGHNVRKQAQMTMRCMHALVRVQARVRARRIQLTHQKLHKNMEADHQYSKPTSPLFEDVGESRRQSFQKIQANDLRKHEALMERERALAYAFNYQQQQKQFLHADLDDDDIGKTKWGWNWLEHWMSSQPHQVRNSGPPKTPYTTLPATTTTTTTTDDMSEKTVEMDTVAPPRSSNLKMDQMGQFRLHDDSSPIANRQHQQQHHANVPSYMAPTQSAKAKVRDQGPKPRGSSVPQWNSSTRKSPVVGPGCDSSDSGGGFANYQFMRSPSPTINGIRLQSRRMSAGSPDYVGVDDWALPLGAHGWV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1285 494 PANTHER IQ-DOMAIN 21 1 460 - -
Sto5g1285 494 MobiDBLite consensus disorder prediction 99 119 - -
Sto5g1285 494 ProSiteProfiles IQ motif profile. 181 208 IPR000048 GO:0005515
Sto5g1285 494 MobiDBLite consensus disorder prediction 384 402 - -
Sto5g1285 494 MobiDBLite consensus disorder prediction 319 365 - -
Sto5g1285 494 MobiDBLite consensus disorder prediction 384 456 - -
Sto5g1285 494 MobiDBLite consensus disorder prediction 319 348 - -
Sto5g1285 494 MobiDBLite consensus disorder prediction 103 119 - -
Sto5g1285 494 PANTHER IQ-DOMAIN 5-RELATED 1 460 - -
Sto5g1285 494 SMART iq_5 156 177 IPR000048 GO:0005515
Sto5g1285 494 SMART iq_5 178 200 IPR000048 GO:0005515
Sto5g1285 494 Pfam IQ calmodulin-binding motif 184 199 IPR000048 GO:0005515
Sto5g1285 494 Pfam IQ calmodulin-binding motif 158 175 IPR000048 GO:0005515
Sto5g1285 494 Pfam Protein of unknown function (DUF4005) 381 423 IPR025064 -
Sto5g1285 494 ProSiteProfiles IQ motif profile. 157 185 IPR000048 GO:0005515
Sto5g1285 494 MobiDBLite consensus disorder prediction 419 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1285 Sto-Chr5 8760647 8764089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1285 1 434 IQD Protein Family AT3G49260 45.494 2.33e-98 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1285 - - aprc:113873497 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1285 5 8760647 8764089 Sto5g1285 5 8760647 8764089 ECH