Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1273 ATGGACTATGGTAGACTCCGACGCTCCTCCTTCACGGACACTCCCACTTCCAACCCATCCACCACCGCAGCCTCCAAGAAGAAGCTCATATTACTTTCCTTACTCGCCGTCGTTTTGATCGTCGCCTCCGCTGCCTCCGCCGTTTTGGTGGTCGGCATCCGGGCCCGGGCCTCCGCCTCCGCTCATAATGGGCCGGGCATAAGGCCCAGCCAGGCTATTTCGCGGGCCTGCAGCAAAACGCAATACCCCACGCTCTGCGTGAACTCGCTTCTCCAGTTCCCGGGGTCCACCACCGCGTCGGAGCAGGACATGGTCCACATTTCCTTTAACGTGACCCTGCAGCACCTGAGCAGAGCCCTCTACTCCTCCTCCGCCATCTCCACCGTCCAGATGGATCCACGCGTACGGTCCGCCTACGAGGACTGCCTCGAGCTCCTCGAGGACTCCGTCGACGCCCTCCTCCGCTCCCTCACCTCCGTCGCCGGGAACACCCCCGGCGGCGGCGGCGCCTCCACCGACGACGTGCTGACGTGGCTCAGCGCCGCGCTCACGAATCAGGACACGTGCGCGGAGGGGTTCGAGGACACGAGCGGGACGGTGAAGGATGAGATGGCGAATAATCTGAAGGACTTGGCGGAACTGGTGAGTAATTGCCTGGCGATATATTCGGCGAGCGGGGGCGACGATTTCTCGGGGGTGCCGATACAGAACAGGAGAAGGTTAATGGGGGATATAACGAGCGATAATGAGGACGATATATCGGAGAAATTTCCGAGATGGTTCAGCGGAAGAGATAGGAGATTGTTGAGTTTGCCGGTATCGGCGATACAAGCGGATATCGTGGTGGCGAAGGATGGGAATGGAACGGTGAAGACGATCACGGAGGCGATCAAGAAGATTCCCGAGCACAGTACACGCCGGGTTATTGTTTACGTGAGGGCAGGAAGGTACGAAGAGGCAAATCTGAAGGTGGGGAGGAAGAAGACGAATGTGATGTTCATAGGAGATGGGAAGGGTAAGACGGTCATTACAGGTGGAAGAAATTTTGTGGATGGAAGTACTACATTCCACACCGCCTCCTTCGCCGCTTCTGGTGCTGGTTTCATTGCACGAGACATGACGTTCGAGAACTATGCCGGGCCGGGGAAGCACCAGGCGGTGGCCCTCCGTGTCGGAGCCGACCACGCGGTGGTGTATCGCTGCAATGTCATCGGCTATCAAGACACGTGCTACGTCCACTCCAATCGCCAGTTCTTTAGGGAATGTGACATTTATGGAACTGTGGACTTCATTTTTGGCAATGCAGCTGTGGTGTTCCAAAACTGTAGCCTCTACGCTCGAAAGCCCATGGCACAACAGAAGAACACCATCACGGCCCAAAACCGGAAGGACCCAAATCAAAACACTGGTATATCTATTCACAATTGTAGAATCTTAGCCACCTCAGATCTCCAGGCAACCAAGGGAAGTATCCCGACGTATCTAGGCCGTCCGTGGAAATTATACTCTAGAACCGTGTACATGCTATCTTATATGGGTGATCACGTACAACCACGTGGATGGTTGGAGTGGTATGGCAATTTTGCCCTAGACACATTGTACTATGGGGAGTACATGAATTATGGGCCGGGTGCAGCTATCGGTCAACGGGTCAGGTGGAAGGGGTATCGGGTCATCACATCGACGTTGGAGGCAAGTAGGTTCACGGTGGGGGAGTTCATATCGGGGTCGTCGTGGTTGCCGTCGACCGGAGTGGCATTTGTGTCTGGCTTATCTACTTAG 1782 0.5572 MDYGRLRRSSFTDTPTSNPSTTAASKKKLILLSLLAVVLIVASAASAVLVVGIRARASASAHNGPGIRPSQAISRACSKTQYPTLCVNSLLQFPGSTTASEQDMVHISFNVTLQHLSRALYSSSAISTVQMDPRVRSAYEDCLELLEDSVDALLRSLTSVAGNTPGGGGASTDDVLTWLSAALTNQDTCAEGFEDTSGTVKDEMANNLKDLAELVSNCLAIYSASGGDDFSGVPIQNRRRLMGDITSDNEDDISEKFPRWFSGRDRRLLSLPVSAIQADIVVAKDGNGTVKTITEAIKKIPEHSTRRVIVYVRAGRYEEANLKVGRKKTNVMFIGDGKGKTVITGGRNFVDGSTTFHTASFAASGAGFIARDMTFENYAGPGKHQAVALRVGADHAVVYRCNVIGYQDTCYVHSNRQFFRECDIYGTVDFIFGNAAVVFQNCSLYARKPMAQQKNTITAQNRKDPNQNTGISIHNCRILATSDLQATKGSIPTYLGRPWKLYSRTVYMLSYMGDHVQPRGWLEWYGNFALDTLYYGEYMNYGPGAAIGQRVRWKGYRVITSTLEASRFTVGEFISGSSWLPSTGVAFVSGLST 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1273 593 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 224 IPR035513 -
Sto5g1273 593 PANTHER PECTINESTERASE 17 591 - -
Sto5g1273 593 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 71 223 IPR035513 -
Sto5g1273 593 Pfam Plant invertase/pectin methylesterase inhibitor 72 221 IPR006501 GO:0004857
Sto5g1273 593 ProSitePatterns Pectinesterase signature 2. 424 433 IPR033131 -
Sto5g1273 593 Pfam Pectinesterase 279 576 IPR000070 GO:0030599|GO:0042545
Sto5g1273 593 TIGRFAM PME_inhib: pectinesterase inhibitor domain 49 222 IPR006501 GO:0004857
Sto5g1273 593 Gene3D - 273 591 IPR012334 -
Sto5g1273 593 SUPERFAMILY Pectin lyase-like 274 590 IPR011050 -
Sto5g1273 593 PANTHER PECTINESTERASE 17 591 - -
Sto5g1273 593 MobiDBLite consensus disorder prediction 1 22 - -
Sto5g1273 593 CDD PMEI-like_3 76 221 - -
Sto5g1273 593 SMART PMEI_2 68 221 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1273 Sto-Chr5 8652198 8655068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1273 1 592 Carbohydrate Esterase AT5G53370 65.000 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1273 - - gmx:106796002 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1273 5 8652198 8655068 Sto5g1273 5 8652198 8655068 ECH