Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1268 ATGTCAGACAATACTGATATGCGTAGAATTAAGGATATTCTTGTTCTTCTCAGTGTGGGTGTTGGTGATGATGTTGTTCACATTAATCTTCTTGATTTCAGAGACGAAGGGGATTTCCATGGAAGACATGAGGATTTCTCTCAGGAACTTCAACAATTTGAAGACTACTGCACAACCCACAAGTCCAATGCTTTAGTGAGTGACCTTGTTGACTCTTCTGGCATATTGGAGTATGATTTGGCAGTAGAAGGGGATCTGTTTAAGGCCCCTGAACCTATACTTGAAGAACCTTTGATGGACCTGGATCCTGTGGCGGCAGCCATATCGATGATATCTTGCGGGGAAGATGTTGTCTCGTCGGAGGGACTAAAATCCACGGACATCGATGCTCTTCAAAGTGAGCAGCTTCTGAGTGAGGTATTCTATGAGTGCAAAAAGGATCTCTTAGAGAAGGCTGCAATAGACTCACCATTGTCTGAGATTCTGGATATCAAGGTTCCTCTTTTGAATACGGATGAAAATCAaattcaagagaacaaacaaattCCTGACATGATATTACCGAAAAGTGTCAGTTCGGAATGTCTGAACTCAATGGATTGGATGCAAGGAGCTGCCATCAAGCCTACTTTTCTTGACTTTCCGGGGATAGATTTCAATGAAGTTTATGGCATGAGGAGGGCGTTTAGCGAAGGAGATATAAAGGCTCTTGGTAATGGTAATGTGAGCCTCATACAATCTCCTCCTGAGAGGCCCTTTATTATCAGCAACTGCACCAGCGAGGAACGGCAAGAAAAGCTCTCCAGATACAGGAACAAGAAGACGAAGAGAAATTTTGGCAGGAAAATCAAGTATGCTTGTCGAAAGGCTCTTGCTGACAGTCAACCGAGAATCCGTGGAAGATTTGCAAAAACCGAAGAATGTGATGTCAAGAGGCtataa 942 0.4246 MSDNTDMRRIKDILVLLSVGVGDDVVHINLLDFRDEGDFHGRHEDFSQELQQFEDYCTTHKSNALVSDLVDSSGILEYDLAVEGDLFKAPEPILEEPLMDLDPVAAAISMISCGEDVVSSEGLKSTDIDALQSEQLLSEVFYECKKDLLEKAAIDSPLSEILDIKVPLLNTDENQIQENKQIPDMILPKSVSSECLNSMDWMQGAAIKPTFLDFPGIDFNEVYGMRRAFSEGDIKALGNGNVSLIQSPPERPFIISNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEECDVKRL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1268 313 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 58 311 - -
Sto5g1268 313 ProSiteProfiles CCT domain profile. 263 305 IPR010402 GO:0005515
Sto5g1268 313 PANTHER CCT MOTIF FAMILY PROTEIN 58 311 - -
Sto5g1268 313 Pfam CCT motif 263 305 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1268 Sto-Chr5 8587356 8594643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1268 245 304 C2C2-CO-like Transcription Factor Family AT3G02380 45.000 7.43e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto5g1268 CCT 2.1e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1268 - - gmx:100814332 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1268 5 8587356 8594643 Sto5g1268 5 8587356 8594643 ECH