Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1266 ATGATAATCAAACGGAACCTGAAAACCCAAATGCCGAGTCTGAAACGGTGCAAACTCGGTGACTCGGCGGGTGACGACGATGATTGCTCTGCGGCtcggaagaagaggaagactaATGGGCATTATCCTTTGAATCTTCTCGGTGATGTCGCTGCCGGCATACTTCCTGTCAGCTTCCATGGCTTACTCAGCGCTGGTGTTTCTGAGAAGGGCTTTTCTACTTCATGGTGCACCGAAGTCTCGTGTTCCCCTGTCGAGGTGGAGTCAAAGTCGAAGGGTGCGAACTCTGTAACAGCTAAGATAAATCGGCCTGTGGAAGAACCACGGCCGCCGCTGGTAAGAACTTCAAGAGGTCGAGTTCAGGTACTGCCTTCACGTTTTAATGACTCGGTTATTGAAAATTGGAAGAAAGACGGTAAGACTAGTGGTTTTCAAGAAGAACTCGATACTAGAAAGGAGAAATTTAGTTTTAGGACACCAAAATCATACAATCAGAACACCAAGAAAGGAAGAAACGATGATAAAATTGGCCATAGGTCTCGCAAATATACGGCATTGtgtgaagaggaGAATTTTCATACGAGGAAGTATTCAACTCCGCGTACTGCACTCACCTTGAGGCGCCAGCAACTAATTGAAGATGATAGACGCAATGAAAGATTTTTGAAGGAGAATGACGATAAAAAAGGTGACTTATATGGACCGGAAGACTTTTACGCAGGTGATATAGTGTGGGCCAAAGCAGGGAGGAAGGAGCCATTTTGGCCAGCCATTGTCATTGATCCAATGTCTCAGGCACCTGAGCTGGTCTTGAGGTCTTGTATAGCTGATGCAGCATGTGTGATGTTTCTTGGGTACTCTGCTAATGAAAACCAACGGGACTATGCGTGGGTGAAACATGGGATGATTTTTCCGTTTATAGATTATGTTGATAGGTTCCAGGGACAGATTGAATTGAGTTACTATAACCCCTCTGATTTTCAAGTGGCAATAGAGGAGGCATTCTTGGCAGATCGTGGGTTTACAGAGAAGTTGATAGCAGATATAAATATAGCAGCTGGCAACACAGGGTATGATGAAACCATTCTAAAAGGCATTCAGGAGGCTAATGGTTCAAAGCAGTATGCAGGATGTCAATTTCTGAGCCAGGAGTTTTTTGATAAGAGGAAAGACTCACGACCTTGTGAAGCCTGTGGATTGGATCTTCCTTTCAAAATGTCAAAGAAAACAAAGGATTCAACTCCTGGTGGTCAATTTTTATGTAAAATATGTGCTAGGTTAACAAAATCAAAACATTATTGTGGCATATGCAAGAAAATTTGGAATCATTCAGATAGTGGAAGCTGGGTGCGGTGTGATGGATGTAAGGTGTGGGTGCATGCGGAATGCGACAAAATTTCCAGCAACCTTTTCAAGAATCTTGGAGGCACTGATTATTATTGCCCTACTTGTAAAGCAAAGTTTGACTTTGAGCTATCTGATTCAGAAAAATCACAGCCAAAAGTCAAATGGAACAAGAATAGCGGGCAGCTAGTGCTACCAAACAAGGTCACTGTTCTCTGCAATGGTGTGGAAGGCATATATTTTCCTAGCCTTCACTTAGTTGTGTGCAAGTGTGGGTTTTGTGGGACAGAAAAGCAACCACTTAGTGAATGGGAACGACACACGGGTTCCAAATCAAGAAATTGGAGAACAAGTGTTAGGGTGAAAGGCTCCATGCTGCCACTGGAACAATGGATGCTACAGTTGGCAGAATTTCATGCCAATGCTCTAGTTTCTGTCAAACCAAAAAAACCATCTTTAAGAGAAAGGAAGCAGAAGTTGCTTACATTTTTGCAAGAGAAGTATGAACCTGTTTATGCTAAGTGGACAACAGAACGGTGTGCTGTTTGTAGATGGGTAGAAGACTGGGactataataaaattatcatttgcaACAGATGTCAAATAGCTGTTCATCAAGAATGCTATGGAGCAAGAAGTGTCCGAGACTTTACATCATGGGTTTGCAAAGCTTGTGAAACACCTGAGATAAAACGAGAGTGTTGTCTTTGTCCTGTAAAGGGTGGTGCTCTAAAGCCAACTGATGTGGACACATTATGGGTTCATGTCACTTGTGCTTGGTTTCGACCTGAAGTCTCTTTTGCCAGTGATGAAAAGATGGAGCCTGCCTTGGGCATTCTGAGTATTCCATCAAATTCTTTTGTGAAGATATGTGTTATATGTAAGCAAATTCACGGTTCATGCACACAATGTTGCAAGTGCTCCACTTATTTCCATGCCATGTGTGCATCAAGGGCTGGGTATCGCATGGAGTTGCATTGTTTGGAGAAAAATGGTAGGCAGACAACAAAAATGGTTTCTTATTGTGCATATCACAGGGCTCCAAATCCAGACACTGTTTTGATTATGCAAACCCCTCTTGGGGTTATTTCAACTAAAAGCCTTctccaaaataagaaaaaatctGGGTCAAGGTTAATTTCATCAAATAGAATAAAGCTCGAAGACACTCCTCCGGTGGATAACACTGAGCATGAGCCATTTTCTGCTGCTAGGTGCCGTGTCTTTCAAAGAACAAATCTTAGCAAAAAGAGAGCAGCGGATGAAGCCATTTCTTATCGTGTGAAGGGTCACTGCCATCATCCTTTAGATGCAATACAGAGATTAAATGTATACAGGGTGATAGAGGAGCCTCCgacattttcttcttttagagAACGTCTGTACCACTTACAGAGAACCGAAAATGAACGGGTTTGCTTTGGTAGATCAGGCATACATGGATGGGGCCTCTTTGCCCGTAGAAATATTCAAGAAGGAGAAATGGTTCTTGAATATCGTGGTGAACAAGTGAGACGCAGCATTGCAGATCTGAGGGAGGCACGCTATAAGATAGAAGGCAAAGACTGCTATCTATTTAAGATAAGTGAGGAAGTGGTGGTAGACGCCACAGACAAGGGAAATATAGCCCGGCTTATTAACCATTCTTGCATGCCGAATTGCTATGCAAGAATTATGAGTGTGGGTGATGACGAGAGCCGTATTGTACTCATTGCAAAGACTACTGTACCTGCTGGCGATGAACTAACGTATGACTACTTGTTTGATCCAGATGAGCCAGATGAAAACAAAGTCCCATGTTTATGTAAAGCTCCAAATTGCCGGAAATTCATGAATTAG 3183 0.4185 MIIKRNLKTQMPSLKRCKLGDSAGDDDDCSAARKKRKTNGHYPLNLLGDVAAGILPVSFHGLLSAGVSEKGFSTSWCTEVSCSPVEVESKSKGANSVTAKINRPVEEPRPPLVRTSRGRVQVLPSRFNDSVIENWKKDGKTSGFQEELDTRKEKFSFRTPKSYNQNTKKGRNDDKIGHRSRKYTALCEEENFHTRKYSTPRTALTLRRQQLIEDDRRNERFLKENDDKKGDLYGPEDFYAGDIVWAKAGRKEPFWPAIVIDPMSQAPELVLRSCIADAACVMFLGYSANENQRDYAWVKHGMIFPFIDYVDRFQGQIELSYYNPSDFQVAIEEAFLADRGFTEKLIADINIAAGNTGYDETILKGIQEANGSKQYAGCQFLSQEFFDKRKDSRPCEACGLDLPFKMSKKTKDSTPGGQFLCKICARLTKSKHYCGICKKIWNHSDSGSWVRCDGCKVWVHAECDKISSNLFKNLGGTDYYCPTCKAKFDFELSDSEKSQPKVKWNKNSGQLVLPNKVTVLCNGVEGIYFPSLHLVVCKCGFCGTEKQPLSEWERHTGSKSRNWRTSVRVKGSMLPLEQWMLQLAEFHANALVSVKPKKPSLRERKQKLLTFLQEKYEPVYAKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARSVRDFTSWVCKACETPEIKRECCLCPVKGGALKPTDVDTLWVHVTCAWFRPEVSFASDEKMEPALGILSIPSNSFVKICVICKQIHGSCTQCCKCSTYFHAMCASRAGYRMELHCLEKNGRQTTKMVSYCAYHRAPNPDTVLIMQTPLGVISTKSLLQNKKKSGSRLISSNRIKLEDTPPVDNTEHEPFSAARCRVFQRTNLSKKRAADEAISYRVKGHCHHPLDAIQRLNVYRVIEEPPTFSSFRERLYHLQRTENERVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLREARYKIEGKDCYLFKISEEVVVDATDKGNIARLINHSCMPNCYARIMSVGDDESRIVLIAKTTVPAGDELTYDYLFDPDEPDENKVPCLCKAPNCRKFMN 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1266 1060 Pfam PHD-zinc-finger like domain 681 793 - -
Sto5g1266 1060 Pfam PHD-finger 433 486 IPR019787 -
Sto5g1266 1060 Pfam PHD-finger 640 674 - -
Sto5g1266 1060 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 619 676 IPR013083 -
Sto5g1266 1060 Gene3D - 235 339 - -
Sto5g1266 1060 SMART PostSET_3 1044 1060 IPR003616 -
Sto5g1266 1060 CDD SET_SETD1-like 905 1056 - -
Sto5g1266 1060 CDD ePHD_ATX3_4_5_like 682 793 IPR041955 -
Sto5g1266 1060 ProSiteProfiles SET domain profile. 918 1035 IPR001214 GO:0005515
Sto5g1266 1060 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 1060 IPR025780 -
Sto5g1266 1060 ProSiteProfiles PWWP domain profile. 240 309 IPR000313 -
Sto5g1266 1060 ProSiteProfiles Extended PHD (ePHD) domain profile. 679 794 IPR034732 -
Sto5g1266 1060 SUPERFAMILY FYVE/PHD zinc finger 432 488 IPR011011 -
Sto5g1266 1060 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 427 489 IPR013083 -
Sto5g1266 1060 PANTHER PHD FINGER PROTEINS 1 1060 - -
Sto5g1266 1060 ProSiteProfiles Post-SET domain profile. 1044 1060 IPR003616 -
Sto5g1266 1060 SMART set_7 918 1041 IPR001214 GO:0005515
Sto5g1266 1060 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 677 796 IPR013083 -
Sto5g1266 1060 CDD PHD_TCF19_like 434 484 - -
Sto5g1266 1060 Pfam SET domain 929 1034 IPR001214 GO:0005515
Sto5g1266 1060 ProSitePatterns Zinc finger PHD-type signature. 628 673 IPR019786 -
Sto5g1266 1060 SMART PHD_3 433 485 IPR001965 -
Sto5g1266 1060 SMART PHD_3 627 674 IPR001965 -
Sto5g1266 1060 SMART PHD_3 738 794 IPR001965 -
Sto5g1266 1060 SUPERFAMILY FYVE/PHD zinc finger 626 690 IPR011011 -
Sto5g1266 1060 SUPERFAMILY Tudor/PWWP/MBT 231 337 - -
Sto5g1266 1060 CDD PHD_ATX3_4_5_like 627 673 IPR042011 -
Sto5g1266 1060 ProSiteProfiles Zinc finger PHD-type profile. 625 676 IPR019787 -
Sto5g1266 1060 SUPERFAMILY SET domain 908 1060 IPR046341 -
Sto5g1266 1060 Pfam PWWP domain 241 334 IPR000313 -
Sto5g1266 1060 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATX4 1 1060 - -
Sto5g1266 1060 ProSiteProfiles Zinc finger PHD-type profile. 431 487 IPR019787 -
Sto5g1266 1060 Gene3D SET domain 812 1060 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1266 Sto-Chr5 8573907 8583720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1266 628 793 C2H2 Transcription Factor Family AT3G14740 32.948 8.12e-20 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Sto5g1266 zf-HC5HC2H_2 2.2e-27 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1266 - - aprc:113853254 1842.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1266 5 8573907 8583720 Sto5g1266 5 8573907 8583720 ECH