Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1265 ATGATCAACTTCTACTTCTCCCGTACTTGCTTGAGGATATTAATATTGCTCCTACTCGCAATCACCGGCGCGTGCAACCCACGCTGCCGGGAGCTAAGTTGCGGACGTGATGGTCCACCCGTTCGATTTCCCTTCCGACTCAAAGATAAACAACCCCACCACTGTGGCTCTCACGGCTTCGATCTCACTTGCACACAAAATCACCAAACATTACTTGAATTTCCCACACCTGCCGGTCACGTCCAACTCTTCATCAAACACATAAATTACATGTCTCAAACTCTTGAAGTATATGACCCACAAGATTGCCTTCCCAACAAGTACCTAAAACTCAAGGACTCAATCTTACTTTCGCCTTTCACAATTGAGCCACCCTATTCACCATTTGGAATCAGTTTCTTTGATTGCTCCtcagtatcttcatcttgtcctGTTTTAGCTGTTGACTCCCAAGACTCATTCCTTTGCCCCGAACTAATATTCTGTACCAAGATGTTTGATGATGAGTCGAGCCTTGTTTCTGCGGGTGCATTGAAGAAGAATTCTTTGGATTTGAAGTGGATGAAACCAGATTGTAGTAGATGTGAATGGAATGGGAAGATTTGTGGTCTCAAGGATAATGGCAccactgaagaagaagaagaagatgatgatattcAATGTCTTGAGGCAAGTACTGACCATGAGTCCAAGATTCCTAAATCAATCATTCTAGCTGTTGAagGTGTGGGAGGTTCGATtgggttggttattttgttgcttgtaGTTTTTCAGATCTACAGCTACTTTAGAATTAAGGAAGAGGATCAAATCAGAGTTGAAAAATTTTTGGATGATTACAAGGCTCTCAAACCCACTAGATTCTCTTATGCTGATCTTAAACGTATTACAAACAACTTTAAGGTTAAGTTAGGTGAAGGAGTTCATGGAGCAGTTTTTAAAGGTAAATTATCTAATGAAATTTTGGTGGCTGTAAAGATACTCAATAATACAGAGGGAGATGGGAAAGATTTCATTAATGAAGTCGGAACCATGGGTAAGATCCACCATATTAACGTGGTTCGTTTGTTGGGTTTTTGTGCTGATGGGTTTCATCGTGCTTTGGTTTATGATTTCTTTTCAAATGGTTCACTACAAAATTTTGTAACTTCACCAAACAAAGACAACTTTCTTGGATGGGAGAAGATACAACAAATTGCGGTTGGCATAGCTAAAGGGATTGAGTATCTTCACCAAGGCTGTGATCATCAAATCCTTCACTTTGATATCAATCCTCATAATGTGTTATTGGATCAAAACTTTGTTCCGAAAATTTCAGATTTTGGTCTCGCTAAATTGTGCTCTAAAAATAAAAGCGTAGTGTCAATGACGGCAGCAAGAGGAACTTTAGGCTACATTGCACCTGAAGTGTTCTCTAGAAACTTTGGGAATGTATCGTATAAGTCGGATATTTATAGTTATGGAATGTTATTACTAGAAATGGTGGGAGGAAGAAAGAACACAAGCGCAGTTGAAGAAaattttcaagttttatatCCAGAATGGATTCATAATTTAGTTGAAGGAGGAGACATGAGCATCCatatagaaaaagaagaggagaaTAAAATTGGAAAGAAATTAGGAATTGTGGGACTTTGGTGCATTCAATGGCACGCTGTGAATCGTCCATCCATAAAGTCAGTGGTTCAAATGcttgaaggagaaggagacaAATTGAAGGTGCCCCCTGCTCCTTTCGATTCCACTGCTTCTGTTACTACAAGTACCAAGATTCCATCGAGATCTTTGAATTTGGAGTTGGAAGTGATCcatgaataa 1821 0.369 MINFYFSRTCLRILILLLLAITGACNPRCRELSCGRDGPPVRFPFRLKDKQPHHCGSHGFDLTCTQNHQTLLEFPTPAGHVQLFIKHINYMSQTLEVYDPQDCLPNKYLKLKDSILLSPFTIEPPYSPFGISFFDCSSVSSSCPVLAVDSQDSFLCPELIFCTKMFDDESSLVSAGALKKNSLDLKWMKPDCSRCEWNGKICGLKDNGTTEEEEEDDDIQCLEASTDHESKIPKSIILAVEGVGGSIGLVILLLVVFQIYSYFRIKEEDQIRVEKFLDDYKALKPTRFSYADLKRITNNFKVKLGEGVHGAVFKGKLSNEILVAVKILNNTEGDGKDFINEVGTMGKIHHINVVRLLGFCADGFHRALVYDFFSNGSLQNFVTSPNKDNFLGWEKIQQIAVGIAKGIEYLHQGCDHQILHFDINPHNVLLDQNFVPKISDFGLAKLCSKNKSVVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTSAVEENFQVLYPEWIHNLVEGGDMSIHIEKEEENKIGKKLGIVGLWCIQWHAVNRPSIKSVVQMLEGEGDKLKVPPAPFDSTASVTTSTKIPSRSLNLELEVIHE 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1265 606 PANTHER RUST RESISTANCE KINASE LR10-RELATED 18 606 IPR045874 GO:0004672
Sto5g1265 606 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Sto5g1265 606 SUPERFAMILY Protein kinase-like (PK-like) 282 567 IPR011009 -
Sto5g1265 606 Gene3D Phosphorylase Kinase; domain 1 272 372 - -
Sto5g1265 606 Pfam Wall-associated receptor kinase galacturonan-binding 29 99 IPR025287 GO:0030247
Sto5g1265 606 Gene3D Transferase(Phosphotransferase) domain 1 373 575 - -
Sto5g1265 606 Pfam Protein kinase domain 301 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1265 606 PANTHER RECEPTOR-LIKE KINASE 18 606 - -
Sto5g1265 606 ProSiteProfiles Protein kinase domain profile. 298 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1265 Sto-Chr5 8564449 8566366 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1265 263 579 Receptor kinase-like Gene Family AT1G66980 49.231 3.47e-99 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto5g1265 Pkinase 2.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1265 - - adu:107468090 654.825