Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1263 ATGAAAAGTGAAGATCAAGCAAGAGTGGAAACTTTTCTAAAGGATTACAAGGCACTCAAACCAACAAGGTTCTCTTATGCTGATCTCAAGAGAATTACCAATAATTTTAAGGAAAAACTAGGCGAAGGAGCTCATGGAACAGTCTTCAAGGGTAACATCTCCAATGAAATTGTAGTAGCTGTAAAGATCCTAAATAGCTTAGAGGATGATGGAAAAGAGTTCATTAATGAAGTGGGAACCATGGGTAGAATCCATCACATCAATGTAGTTCGCTTGTTGGGCTTCTGTGCTGATGGTTTTCATCGTGCTCTTGTGTATGATTTTTTTCCAAATGGTTCGTTACAAAACTTCATATCTCACCCAGACAACAATGGCGGCTTATTCCTTGGATGGGAGAAGCTCCAACAAATAGCCATTGGCATAGCTAAAGGAATTGAGTATCTCCACTTAGGTTGTGATCAGCGTATTATTCACTTTGACATCAATCCTCATAATGTGTTATTAGATCATGACTTCACACCAAAAATTTCTGATTTTGGTCTAGCCAAATTATATCCTAAAAACCAGAGTATAGTGTCAATGACTAGCGCTAGGGGAACCTTGGGTTATATTGCACCTGAGGTTTTTTCTAGAAATTTTGGAAATGTGTCATATAAGTCAGATATTTATAGTTACGGAATGATGTTGGTAGAAATAGTTGGAGGAAGGAAGAATACAAATGCAGATGAAGAAAGTTTTCAAATTTTGTATCCAGATTGGATTCATAGCTTGATTGAAGGAAGAGATATACACATCCATATTGAAGATGAAGAGGACATTAAGATGGCAAAGAAATTAGCAATTGTGGGACTTTGGTGTATTCAATGGCATCCAGTGGATCGTCCATCTATAAAAGCAGTGATACAAATGCTGGAAGGAGAAGTAGAGCAGTTAAAAGTGCCACCTTCTCCTTTTGACTCCACCTCTTCTACTAATATAAGTGCAACTATTCCTACAAGACATTTGAATTTTGAGTTGGAACATCTTTATTGCTACATAAGGCCCACTCCGAAGCTTTCCTTTGTAAACAGAGCCGAAGCCTCCTTCGCCCAACTTCACTTTGAAACCACCGGTCATCTTCTTGATTTCACTATAAGAGTAGCGTATGGGGTTAAGATCAAAAGCACAGTCGTAAATATAACTCCAAGCAATACTCGGAATAGCAAGAGTGATGCAAAAAGGTATCGTCCTATGGTTTCTTCTGGCCAAAAGAGTACTGGTGAGGTTGGACGTGTTATTACAGTGTACATTCCTGTGTGGTAA 1302 0.3848 MKSEDQARVETFLKDYKALKPTRFSYADLKRITNNFKEKLGEGAHGTVFKGNISNEIVVAVKILNSLEDDGKEFINEVGTMGRIHHINVVRLLGFCADGFHRALVYDFFPNGSLQNFISHPDNNGGLFLGWEKLQQIAIGIAKGIEYLHLGCDQRIIHFDINPHNVLLDHDFTPKISDFGLAKLYPKNQSIVSMTSARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMMLVEIVGGRKNTNADEESFQILYPDWIHSLIEGRDIHIHIEDEEDIKMAKKLAIVGLWCIQWHPVDRPSIKAVIQMLEGEVEQLKVPPSPFDSTSSTNISATIPTRHLNFELEHLYCYIRPTPKLSFVNRAEASFAQLHFETTGHLLDFTIRVAYGVKIKSTVVNITPSNTRNSKSDAKRYRPMVSSGQKSTGEVGRVITVYIPVW 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1263 433 Pfam Protein kinase domain 36 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1263 433 ProSitePatterns Protein kinases ATP-binding region signature. 40 62 IPR017441 GO:0005524
Sto5g1263 433 ProSiteProfiles Protein kinase domain profile. 34 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1263 433 MobiDBLite consensus disorder prediction 397 416 - -
Sto5g1263 433 Gene3D Transferase(Phosphotransferase) domain 1 109 315 - -
Sto5g1263 433 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 340 IPR045874 GO:0004672
Sto5g1263 433 Gene3D Phosphorylase Kinase; domain 1 8 108 - -
Sto5g1263 433 SUPERFAMILY Protein kinase-like (PK-like) 17 305 IPR011009 -
Sto5g1263 433 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1263 Sto-Chr5 8556038 8561371 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1263 1 317 Receptor kinase-like Gene Family AT1G66910 46.154 1.34e-102 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto5g1263 Pkinase 2.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1263 - - gmx:100819302 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1263 5 8556038 8561371 Sto5g1263 5 8556038 8561371 ECH