Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1262 ATGGAGAGAAGGGAGGGCCTAACGTTAAGGCGGCGGTTTTTGGTGCTATTGATTCTGCTTCTAACAGTGAGTTGTGAAGCAAAGCAAGAAGAAGCATCTTCATGTGTTCCTTCTCGGTGCGGCAAAATCGACAACATAAGGCGTCCATTTCGACTACGAGACGACCCATCAAGCTGTGGCGATAAGAGATACGAATTAGCTTGCGAGAATAACCAAACAGTGCTTTACCTATACTCAGGAAGATACTACGTGCTGGGAATTCACTACAACAACTACACAATCCGAATCGTCGATCCAGGGATTGAAGATGGTAATAATAATTGCTCCTCCCTCCCTCTCTACTTCCTCTCTCGATCCAATTTCAGCGACACTTACATTTCGGAGGCCGCAGATGGGGATCCATATCGCGCCTTCAATCCCGCCGCGGCCACAATCAAGACAATATTCCAGCACGTCGTTTACTTGAACTGTAGCGATCCGGTGTACTCGAATTCTTGGTATGTGGATACGTCTTCTTGCGTGAATTGGCATTCCAAGGGCTATGTTTATGCGACGCCGGGAGAATTGTTAGAGGCTGGAATGGTGGAAGTTGAGTGCCGCGTGAAATTGGTGGCGGCGATTTCGTTGGATTGGGTTTCGTTGCCGGGGAATGAAACGCTGTCGTATGGTGAGATTCATAGTGTGTTCTCGCGAGGGTTCGAGCTTTCGTGGTGGCCTGGAGCTTGTGCTGAGAATACTTCTTGTTTAATTGATGATTGCATTTTCGACGCGGAAACGCAGAAAGTTGGATGCAGGCCTTTTTACACTTGTATCACTCCGCTCGGATACGAGATGGTGTCTTGTGGAGATGTGCCAACCCTGCGAATATTTATAGAAGATTATCTCTATGGTATAGTCAAGGGATATTATGAAATAAGAGGGAAGCATGTATGGGGTCCCTACACTGACTACAATGTTAGTTTATCACAGTTTGGAGTGGACATGGGAGTAGTCACAGCAAGATACTTTCTACCACTAATTTCAGCCAGATTCTTATTGGGTCTCATATTCTTGTTAGTACTTGtgatttatacatataaaaggAGACACTTATCAATGTATAAAGAGATTGAAGATTTTCTGCAACTTCATAACCTCATACCAGTAAGATACTCCTACAAGGAATTAAAGATTATGACCAAAGGTTTCAAGACCAAGTTAGGTGAAGGAGGTTTCGGCACTGTTTATCAAGGAAAGCTACGTAGTGGGCCTCTTGTTGCTATCAAAATGTTGGGTAAATCTAAGGATAATGGCAAGGATTTTATCAGTGAAGTGGCAACTATTGGAAGAATACATCATTTTAATGTGGTTCATCTTATTGGATTCTGTGTTGAGAGATCAAAGCGTGCTCTTGTCTATGAATTTATGTCTAATGGCTCTcttgataaatatattttccTCAAAGAAGGAAGTGTTCCGTTAAGTTATGATAAAATATATCAGATAGCTCTAGGAGTGGCCCGTGGAATTGCTTATCTTCATCATGGGTGTGATATGCAAATTTTACATTTTGATATCAAACCCCATAACATTCTTCTTGATGACAACTTCACTCCAAAGATTTCAGACTTTGGACTTGCAAAGCTATATTCCGTGGATGATAGCATTGTCCCTTTAACGGCAGCGAAAGGAACAATAGGGTACATGGCTCCTGAATTGTTCTACCGAAATATGGGGGGAGTGTCCTATAAAGCCGATGTCTATAGTTTTGGGAAGCTTTTGATGGAAATGGCAAGTAAGAGGAAGAATAGCATTCAAAATGAAGATGATTCAAATGAagattattttcctttttggaTATACGATCAACTTGCAGAAGATCAGAATGACATAGAAATATTGGAAAGTTTAACAGGAGAGGAAAAAGATTTAGTAAAGAAGATGTTTATAGTAGCACTATGGTGTATACAATGGAAGCCTAATGATCGTCCTTCAATGAACAAAGTTGTAGATATGTTAGAGGGAGGAATTGAAAATCTTGAAATGCCTCCTAAGCCTTCTTGGTATCAGCATGATGTAGTTGCACAGGATGACAGATCCAGCTATGACCAAACATCATCGTCCATTGACTCCAAATATACTTCCAGCAATTATTCAAGGGAGATTGCTAGTGATGATGAAGAATAA 2166 0.4063 MERREGLTLRRRFLVLLILLLTVSCEAKQEEASSCVPSRCGKIDNIRRPFRLRDDPSSCGDKRYELACENNQTVLYLYSGRYYVLGIHYNNYTIRIVDPGIEDGNNNCSSLPLYFLSRSNFSDTYISEAADGDPYRAFNPAAATIKTIFQHVVYLNCSDPVYSNSWYVDTSSCVNWHSKGYVYATPGELLEAGMVEVECRVKLVAAISLDWVSLPGNETLSYGEIHSVFSRGFELSWWPGACAENTSCLIDDCIFDAETQKVGCRPFYTCITPLGYEMVSCGDVPTLRIFIEDYLYGIVKGYYEIRGKHVWGPYTDYNVSLSQFGVDMGVVTARYFLPLISARFLLGLIFLLVLVIYTYKRRHLSMYKEIEDFLQLHNLIPVRYSYKELKIMTKGFKTKLGEGGFGTVYQGKLRSGPLVAIKMLGKSKDNGKDFISEVATIGRIHHFNVVHLIGFCVERSKRALVYEFMSNGSLDKYIFLKEGSVPLSYDKIYQIALGVARGIAYLHHGCDMQILHFDIKPHNILLDDNFTPKISDFGLAKLYSVDDSIVPLTAAKGTIGYMAPELFYRNMGGVSYKADVYSFGKLLMEMASKRKNSIQNEDDSNEDYFPFWIYDQLAEDQNDIEILESLTGEEKDLVKKMFIVALWCIQWKPNDRPSMNKVVDMLEGGIENLEMPPKPSWYQHDVVAQDDRSSYDQTSSSIDSKYTSSNYSREIASDDEE 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1262 721 SUPERFAMILY Protein kinase-like (PK-like) 378 666 IPR011009 -
Sto5g1262 721 Gene3D Transferase(Phosphotransferase) domain 1 469 677 - -
Sto5g1262 721 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 12 695 - -
Sto5g1262 721 MobiDBLite consensus disorder prediction 692 713 - -
Sto5g1262 721 PANTHER RUST RESISTANCE KINASE LR10-RELATED 12 695 IPR045874 GO:0004672
Sto5g1262 721 Pfam Wall-associated receptor kinase galacturonan-binding 35 98 IPR025287 GO:0030247
Sto5g1262 721 SMART serkin_6 394 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1262 721 Pfam Protein kinase domain 397 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1262 721 MobiDBLite consensus disorder prediction 689 721 - -
Sto5g1262 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672|GO:0006468
Sto5g1262 721 CDD STKc_IRAK 400 668 - -
Sto5g1262 721 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Sto5g1262 721 ProSiteProfiles Protein kinase domain profile. 394 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1262 721 Gene3D Phosphorylase Kinase; domain 1 368 468 - -
Sto5g1262 721 ProSitePatterns Protein kinases ATP-binding region signature. 400 422 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1262 Sto-Chr5 8550654 8553881 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1262 13 682 Receptor kinase-like Gene Family AT5G38260 33.137 2.18e-106 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto5g1262 Pkinase 6.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1262 - - gmx:100305367 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1262 5 8550654 8553881 Sto5g1262 5 8550654 8553881 ECH