Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1258 ATGGTTAGAAGCAGAAGGGGAGAATTATTGTGTGTTGCGTCGGTGTTCATTAGCATTCTTGTTCTGCGTCTCCCGCAAAGTGTCGTTGCAGGTGCTTGCGTTTCATCTTGCGGCAAAATCACCAACATAAGCTATCCATTCCGATTGAAAGGGGATCCAGACGAGTGCGGGGTCAACAATTACGAGTTGGAATGTAGGAAGCAGCAGATTACCGTATTACGCTTATTCTCCGCAGAATTTCATGTACTCTCCATCAATTACAACAACTACACAATCCGACTCGTGGATCCCAACATTCACAACTCCAATTGCTCCTCCATCCCTCGCTACTTCTTCCACATATACAACTTCACCCAAGTGGGACCCAACACCAACACTATAGATAATCGATTTTCTTTTTACCATCCTTCAAGTCCTGGAAGTTACATCAGATTGCATGGAAATATCATATACTTGAATTGCACAAGTCCGATCCTAAATAATACTCGTTTGGAGGATGCCTCTTCCTGCTTCGGTGGGCAGAATATTTACACAGTTGTTGATGATTTAGGGGTGAATGATTGGGAGATTGGGTGTCACGTGATGGGCACGACGGCATATGTACTTGAAGGTTCTTGGATAAACGACGGCGTATCGTACATGGATATTCACAGGCAGGCGGTGTTTGGATTTGAGGTTTCGTGGGTGGTTGGAGGTTGTGATCAACATTGTGGGGGTGGGGATACACAATCTTGTTACTTCAATCAAACCGGTGGGAAGGTGGAATGCTACATCCCCGCCGATTACTTGTATGGGGAAAACTGTCATTATACCATTCTCAACGCCCAAATTGTCTACCAATGCAGACGCAgaATATTGTCCAAGTTTCGCAGATATATGCAAGCAATTCTGGAAAGCATATCAAAAGAGATATACCTAATAGTACCAAATTCTGCTGGTCGATATGGACTACTATCATACGTGATGGCTAGATTCCTCATTGGATCTACACTTCTGATTGCGCTATTACTTACCAATTGGCGAAGAAGACACTTATCCATGTATGGAAATATTGAACATTTTTTGCAAGATAACGACCTCATGCCAATAAGGTACTCCTATAAGCAAATTAAGAAGATGAGCAGAGGCTTCAAAGACAAGTTGGGAGAGGGAGGCTTTGGCACTGTGTATAAAGGGAAGCTACGTAGTGGGCCACTCGTGGCTATCAAAATGTTAGGTAAATCCAAAGCTAATGGCCAAGACTTCATCAATGAAGTAGCAACCATTGGAAGGATACATCATGTTCATGTGGTTCGATTGATTGGATTTTGCGTGGAGGGATCAAAACGTGCTCTTATTTATGAATTCATGCCCAATGGTTCTcttgataaatatattttctccAAAGAAGGAAGTGTTTTTTTAAGCTATGATAAAATACTTGAGATATCTTTGGGAGTAGCTCGTGGGATTGCCTATCTCCATCATGGCTGCGACAAGAAAATTCTGCATTTTGATATCAAGCCTCATAATATTCTTCTTGATGACAACTTCACTCCAAAGGTTTCCGATTTTGGACTTGCAAGATTATATCCTATTGATGATAGTATTGTTACCTTAACTGCAGCTAGAGGAACAATAGGATATATGGCTCCGGAGCTGTTCTACAAAAATATTGGAGGAATATCTTATAAGGCTGATGTTTATAGTTTTGGAATGCTTTTAATGGAAATGGGAAGCAGAAGGAGAAACCTAAATCCTCACGTAGAGCATTCAAGCCAACTCTATTTTCCCTTATGGATATATGATCAATTCATAGAAGAGAAAGACTTAGAAATTGAAGATTTGGCACAAGAGGAAAAAGACTTGGCTAAGAAGATGTTCATAGTTGCATTGTGGTGTATACAATTGAAGCCAATTGATCGCCCTTCCATGAACAGAGTAGTAGAGATGTTAGAAGCACAAGTTGAAAGCCTTGAAATGCCCCCAAAGCCTTCTCTATATCCTCAAGAAACTGTTGCAGAGGATCATGAATTCAACTCTGACCAAACAGCATCCAACAGCTCCATCCATTCCACCAGTTATGGCAGTGATAATATTCTTGAGGATAATGCTAGCAGCACTTATTAG 2109 0.4087 MVRSRRGELLCVASVFISILVLRLPQSVVAGACVSSCGKITNISYPFRLKGDPDECGVNNYELECRKQQITVLRLFSAEFHVLSINYNNYTIRLVDPNIHNSNCSSIPRYFFHIYNFTQVGPNTNTIDNRFSFYHPSSPGSYIRLHGNIIYLNCTSPILNNTRLEDASSCFGGQNIYTVVDDLGVNDWEIGCHVMGTTAYVLEGSWINDGVSYMDIHRQAVFGFEVSWVVGGCDQHCGGGDTQSCYFNQTGGKVECYIPADYLYGENCHYTILNAQIVYQCRRRILSKFRRYMQAILESISKEIYLIVPNSAGRYGLLSYVMARFLIGSTLLIALLLTNWRRRHLSMYGNIEHFLQDNDLMPIRYSYKQIKKMSRGFKDKLGEGGFGTVYKGKLRSGPLVAIKMLGKSKANGQDFINEVATIGRIHHVHVVRLIGFCVEGSKRALIYEFMPNGSLDKYIFSKEGSVFLSYDKILEISLGVARGIAYLHHGCDKKILHFDIKPHNILLDDNFTPKVSDFGLARLYPIDDSIVTLTAARGTIGYMAPELFYKNIGGISYKADVYSFGMLLMEMGSRRRNLNPHVEHSSQLYFPLWIYDQFIEEKDLEIEDLAQEEKDLAKKMFIVALWCIQLKPIDRPSMNRVVEMLEAQVESLEMPPKPSLYPQETVAEDHEFNSDQTASNSSIHSTSYGSDNILEDNASSTY 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1258 702 MobiDBLite consensus disorder prediction 672 702 - -
Sto5g1258 702 Pfam Protein kinase domain 378 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1258 702 SUPERFAMILY Protein kinase-like (PK-like) 362 646 IPR011009 -
Sto5g1258 702 ProSiteProfiles Protein kinase domain profile. 375 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1258 702 Gene3D Phosphorylase Kinase; domain 1 354 449 - -
Sto5g1258 702 SMART serkin_6 375 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1258 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Sto5g1258 702 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 31 676 - -
Sto5g1258 702 Coils Coil 599 619 - -
Sto5g1258 702 ProSitePatterns Protein kinases ATP-binding region signature. 381 403 IPR017441 GO:0005524
Sto5g1258 702 MobiDBLite consensus disorder prediction 670 702 - -
Sto5g1258 702 Pfam Wall-associated receptor kinase galacturonan-binding 33 96 IPR025287 GO:0030247
Sto5g1258 702 Gene3D Transferase(Phosphotransferase) domain 1 450 656 - -
Sto5g1258 702 PANTHER RUST RESISTANCE KINASE LR10-RELATED 31 676 IPR045874 GO:0004672
Sto5g1258 702 CDD STKc_IRAK 381 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1258 Sto-Chr5 8523834 8527185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1258 37 677 Receptor kinase-like Gene Family AT5G38260 35.152 1.22e-110 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto5g1258 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1258 - - gmx:100305367 716.072