Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1255 ATGATTTGGTATGAGAAATGCTTGTTGTGGGTGATTGTCTTACTTGTGCTTTTGAATGTCGGGAATGGGCAAAACAAATGCAGCTGTGGCGATCTTGATATTCGATATCCCTTCCAACTAGAAGATGGAGTGACTGATCACTGTGCCTATCGTCTATCTTGCCAGAATAACACCCCCATGCTTCACCTCCCTGCATTTCCTCATCCAGTAACGCTCGCTGTCTCAGAAATACATTATGAATCCCACTACTTATACACATATGCCCCTCCTTCCCACTGTCTTCCCTCACTCTTTCTAAAGTTGTACAATTCCTCAGATTTCCCTTTCCAATTCGTCCCACTCTACTCATTCGAGGAATCAGCACCCACCAATCTTACTTTCCTCGATTGCTCCTCAGCAACAGGCATGGATGACACATTATGTTCATCATTTGCACAAGATCTGCTTCACTGCCCTTACCCTGTTGGCTTCAACGACAGTGTTGTTGACTTCTGCTTTATATCCTGCACCAGAATGTTTGATCTAGTTTCACCTCTGTCCGCATTGGATCTCTCGCAGTCGCAGAACAGGCTAACATTGAGATGGACATCGAAGCCAAATCATTGTGGTGTTCAAAATGTTTATTGCAAGCACAAACCAAGTGAGATACCAAGAATTATGATAACCACTACAGGTTCAACATTATTGGTTTTGCTGCTCATTGGGCTCATTCTAATATATCGCCACTTCAAACTCAAAGGAGATGATGAAGCAAGGATTGAACAATTCTTGGAGGATTACAGGGCACTTAAACCTACCCGATTTTCTTATCTCGACCTTAAACGGATCACTAATAATTTTAAGCATAAGTTAGGTGAAGGAGCTCATGGATCAGTTTACAAAGGTCAATTATCTGCTGAAATAGTGGTGGCTGTGAAGATCCTTAATGACTCCTCAGAAGGTGATGGGAAAGACTTCATTAATGAAGTGGGAACCATGGGTAAAATCCATCACATCAACGTGAATTTCATTTCTCTTCCGGACAATAAGGACATATTCTTGGGATGGAACAAGTTGCAACAAATAGCTCTTGGCATAGCCAAAGGGATCGAGTATCTTCACCAAGGTTGCGATCATCGAATTCTTCACTTTGATATTAATCCTCATAACGTGTTGTTAGACCACAATTTTATTCCAAAAATCTCTGATTTTGGTTTAGCAAAATTGTGCTCTAAAAATCGAAGTACAGTGTCAATTACTGCCATTAAGGGAACCTTAGGTTACATTGCCCCTGAAGTTTTCTCTAGAAACTTTGGAAATGTGTCATATAAGTCGGATATTTATAGTTATGGAATGTTGTTGCTAGAAATGGTTGGGGGAAGAAAGAATACAAACAAAAATGAGGAAAGTTTGCAAGTTCTATATCCAGAATGGATTCATAATGTGGTTGAAGAAAGAGATGAGACACACATTCATATTGAAGAAGAAGCAGACATCAGAATTGCAAGGAAAGTAGCAATTGTAGGACTTTGGTGCATTCAGTGGCACCCAGTGAATCGTCCCTCAATGAAAGCAGTGGTTCAAATGCTTGAAGGAGAAGGTGATCAACTAAAGGTGCCTCCCACTCCTTTTGATACCACTGCTTCTGCTTCTACTAGTACAGATGCAACTCTTCCTGCAAGACGTATGAATTTAGAGTTGGAAGTCATTCATGAAGTGGAATAA 1704 0.4067 MIWYEKCLLWVIVLLVLLNVGNGQNKCSCGDLDIRYPFQLEDGVTDHCAYRLSCQNNTPMLHLPAFPHPVTLAVSEIHYESHYLYTYAPPSHCLPSLFLKLYNSSDFPFQFVPLYSFEESAPTNLTFLDCSSATGMDDTLCSSFAQDLLHCPYPVGFNDSVVDFCFISCTRMFDLVSPLSALDLSQSQNRLTLRWTSKPNHCGVQNVYCKHKPSEIPRIMITTTGSTLLVLLLIGLILIYRHFKLKGDDEARIEQFLEDYRALKPTRFSYLDLKRITNNFKHKLGEGAHGSVYKGQLSAEIVVAVKILNDSSEGDGKDFINEVGTMGKIHHINVNFISLPDNKDIFLGWNKLQQIALGIAKGIEYLHQGCDHRILHFDINPHNVLLDHNFIPKISDFGLAKLCSKNRSTVSITAIKGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNKNEESLQVLYPEWIHNVVEERDETHIHIEEEADIRIARKVAIVGLWCIQWHPVNRPSMKAVVQMLEGEGDQLKVPPTPFDTTASASTSTDATLPARRMNLELEVIHEVE 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1255 567 ProSitePatterns Protein kinases ATP-binding region signature. 284 306 IPR017441 GO:0005524
Sto5g1255 567 Pfam Protein kinase domain 349 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1255 567 SUPERFAMILY Protein kinase-like (PK-like) 260 524 IPR011009 -
Sto5g1255 567 PANTHER RECEPTOR-LIKE KINASE 335 565 - -
Sto5g1255 567 PANTHER RECEPTOR-LIKE KINASE 30 334 - -
Sto5g1255 567 Gene3D Phosphorylase Kinase; domain 1 253 337 - -
Sto5g1255 567 PANTHER RUST RESISTANCE KINASE LR10-RELATED 335 565 IPR045874 GO:0004672
Sto5g1255 567 PANTHER RUST RESISTANCE KINASE LR10-RELATED 30 334 IPR045874 GO:0004672
Sto5g1255 567 Pfam Wall-associated receptor kinase galacturonan-binding 28 84 IPR025287 GO:0030247
Sto5g1255 567 Gene3D Transferase(Phosphotransferase) domain 1 338 532 - -
Sto5g1255 567 ProSiteProfiles Protein kinase domain profile. 278 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1255 567 Pfam Protein tyrosine and serine/threonine kinase 280 334 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1255 Sto-Chr5 8506337 8508235 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1255 199 536 Receptor kinase-like Gene Family AT5G39030 41.351 1.08e-80 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto5g1255 Pkinase 3.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1255 - - adu:110273083 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1255 5 8506337 8508235 Sto5g1255 5 8506337 8508235 ECH