Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1253 ATGAGAAGTATGAATTGTGCAATGCTTACTAAGTTAGGCCGGAGGCTTATTGAGGATAGAAATAGCCTTTGGGCTAAGGTTGTTCGATCCAAATACAAGTGTGGTTCGGATTTGATTCCTTTGGTGGACAAGAGAAGGAAGGGTTCCTGTGTTTGGAAAGGTATTTGTAAGGTGTGGGAGAGGGTTGAGCAAGGCCTCAAGTGGAACCTTGGTGATGGCAACACTGTGCGCTTCTGGAAAGACAGATGGGTTCCTGACTGCCCCATTCTTGAGGAGGTTGATGTGACTCAACTTGAGTTGAGGAACTTTAAAGAGGTGGTGAGTGATTATATCACTGATGATCACTGGGATGTGGCTAAGCTGAGAAGGTGGTTTGGGGAGGATATAGTCAGGAGAATCCTGGCTTTACCTACTCCTAGTCATGGGTTTGGGGCTGATAAAGTTGTTTGGGGTCTTAACCCTAATGGTCGTTTCTCGGTGTCCTCTGTTTTCTTTATGGACAGAGAGAAGCCCTTGGAGGATGAGTCTAAGTTTTGGAAGAAGGTTTGGAGGTGGCCAGGGCCCCAGCGTTTTAAATCTTTCCTTTGGCTTTTTAGTAAAGATAAACTTTATACTAACCTGTGTAGATTCGAGAGAAGGATTTTTGGCAATCTACTGTGTCCGAGATGTGGTAGGCACTCTGAATCCTCGCTGCATGCGGTCCGGGACTGTGAAGAGATCAAGAGCATTTGGTTGTCCCTGGTAAAGCCGAGCTGCTGGGGGGAATTCTTTTCCTGTAATATTCGTGAGTGGGTTAGTATGAATCTCTGTAGGAAGGTGGGCAGAGAGGAGTGTGGGGACCTGAATCAGATGTATTGGGAGGTGTTAATGCGGTCCAATGAGATTTCTAATATTTGGAAAGGGAAGGATTCGAAGCATCTGAGTAATGGCAGAGTTGGGGGTGAGAAGTCTGTTACCTGGGTGCCTCCGGAGTCAAGTTGGTACAAGGTCAACGTTGATGGATCTGTCAAGGTCGATGGCTCGGCCTCGTGTGGTGGTGTGATCCGGGACTGCTCCGGTACATGGCAGAAAGGCTTCGTTTTTAACATTGGGGTTTGCGGGGTTGTTGAGTCGGAGCTCTGGGGGATTCTGAAGGGGCTGGAGGTGGCTTGGAGCCACGGTTGTCGGAAGCTCTGTTTGGAGTCTGATTCGCAGAGAGCTCTGGAGATGGTGAAGAAGGGAGTAGAGGCCTCGCACGTGGATGCGGCTTTGGTTGAGAGGGTTCGGTGTATGCTTCAGAGGAATTGGGTGGTGGATCTGGTTCATATCTACCGCGAGGCGAACAAAGTTGCGTACTTTATGGCGGTTAGTGGCCATACGTCTCCGGTGGGGTTAGTCATTCTTGAGGTTCCTCTGGTGGAGCTGGATTTTCTTTATGGAATTCTTGAAGGACTACACCAAATAATAGGGAAACATTTTGATCACCAAACCGATTATGATTTTGGTCTTACACAGCTCGGCATTGACATAGGAGTAGTCACAGCAAGATACATTTTGCCATATATTACTGTAAGATTTTTATTGGGCGTCATATTTTTGTCGGTGTTACTGATTCATACATGTCGAAGGAGACACTTATCAATGTACGAAGATATTGAAGACTTTTTGCAACTTCATAACCTCATGCCAATAAGGTACTCCTACAAGCAAATTAAGAAGATGACCAAAGGTTTCAAACACAAGTTAGGGGAAGGAGGGTTTGGTACTGTGTATAAAGGGAAGCTACGTAGTGGAGACCATGTAGCTATCAAAATGTTGGGTAAATCCAAGACTGATGGTCGAGAATTCATCAATGAAGTGGCAAGTATTGGAAGGATACACCATGTTCATGTAGTTCGGTTGGTTGGATTTTGTGTAGAGGGATCCAAGCGTGCACTTGTTTACGAATTCATGCCTAATGGTTCTCTTGATAAGTATATTTTCTCCAAAGAAGAAAGTGTTTTCTTGAGTTACAAGCAAATACATGAGATATCTTTAGGAGTGGCTCGAGGTATTACTTATCTTCATCATGGCTGTGATATGCAAATCCTGCATTTTGATATCAAGCCTCATAATATTCTTCTTGATGACAACTTCATCCCAAAAGTTTCAGACTTTGGACTGGCTAGATTGTATCCTGTTGATGATAGTATTGTCACTTTGACAGCAGCAAGAGGCACGCTAGGATACATAGCTCCAGAATTGTTCTACAAAAATATTGGGGGAGTGTCCTATAAAGCTGATGTTTATAGTTTTGGAATGCTTCTAATGGAGATGGCAAGCAGGAGAAGGAACCTAAATCCACACGCAGAGCGTTCAAGCCAACTTTACTTTCCTCTATGGATATATGATCAATTCACAGAAGAGAAAGACATAGAAATTGAAGATTTGACACAAGAGGAAAAAGATTTGGCAAAGAAGATGTTGATAGTTGCGTTGTGGTGTATACAATTGAAGCCAATTGATCGCCCCTCAATGAACAAAGTAGTAGAGATGTTAGAAGCGGAAGTTGAAAGCCTCGAACTACCTCCGAAACCGTCTTTGTATCCTCATGAATCTATGGCAGAGAATCATGAATTCAACTCTGACGAAACAGCATCCAATGGCTCCATACCATGTCCTTGA 2643 0.4423 MRSMNCAMLTKLGRRLIEDRNSLWAKVVRSKYKCGSDLIPLVDKRRKGSCVWKGICKVWERVEQGLKWNLGDGNTVRFWKDRWVPDCPILEEVDVTQLELRNFKEVVSDYITDDHWDVAKLRRWFGEDIVRRILALPTPSHGFGADKVVWGLNPNGRFSVSSVFFMDREKPLEDESKFWKKVWRWPGPQRFKSFLWLFSKDKLYTNLCRFERRIFGNLLCPRCGRHSESSLHAVRDCEEIKSIWLSLVKPSCWGEFFSCNIREWVSMNLCRKVGREECGDLNQMYWEVLMRSNEISNIWKGKDSKHLSNGRVGGEKSVTWVPPESSWYKVNVDGSVKVDGSASCGGVIRDCSGTWQKGFVFNIGVCGVVESELWGILKGLEVAWSHGCRKLCLESDSQRALEMVKKGVEASHVDAALVERVRCMLQRNWVVDLVHIYREANKVAYFMAVSGHTSPVGLVILEVPLVELDFLYGILEGLHQIIGKHFDHQTDYDFGLTQLGIDIGVVTARYILPYITVRFLLGVIFLSVLLIHTCRRRHLSMYEDIEDFLQLHNLMPIRYSYKQIKKMTKGFKHKLGEGGFGTVYKGKLRSGDHVAIKMLGKSKTDGREFINEVASIGRIHHVHVVRLVGFCVEGSKRALVYEFMPNGSLDKYIFSKEESVFLSYKQIHEISLGVARGITYLHHGCDMQILHFDIKPHNILLDDNFIPKVSDFGLARLYPVDDSIVTLTAARGTLGYIAPELFYKNIGGVSYKADVYSFGMLLMEMASRRRNLNPHAERSSQLYFPLWIYDQFTEEKDIEIEDLTQEEKDLAKKMLIVALWCIQLKPIDRPSMNKVVEMLEAEVESLELPPKPSLYPHESMAENHEFNSDETASNGSIPCP 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1253 880 Coils Coil 793 813 - -
Sto5g1253 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 689 701 IPR008271 GO:0004672|GO:0006468
Sto5g1253 880 Pfam zinc-binding in reverse transcriptase 158 244 IPR026960 -
Sto5g1253 880 SUPERFAMILY Protein kinase-like (PK-like) 553 840 IPR011009 -
Sto5g1253 880 SUPERFAMILY Ribonuclease H-like 326 447 IPR012337 -
Sto5g1253 880 ProSiteProfiles Protein kinase domain profile. 569 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1253 880 PANTHER RUST RESISTANCE KINASE LR10-RELATED 467 867 IPR045874 GO:0004672
Sto5g1253 880 CDD RNase_H_like 330 448 IPR044730 -
Sto5g1253 880 Gene3D Phosphorylase Kinase; domain 1 543 643 - -
Sto5g1253 880 Pfam Protein kinase domain 572 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1253 880 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 467 867 - -
Sto5g1253 880 ProSitePatterns Protein kinases ATP-binding region signature. 575 597 IPR017441 GO:0005524
Sto5g1253 880 SMART serkin_6 569 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1253 880 Gene3D - 327 452 IPR036397 GO:0003676
Sto5g1253 880 Pfam Reverse transcriptase-like 331 448 IPR002156 GO:0003676|GO:0004523
Sto5g1253 880 Gene3D Transferase(Phosphotransferase) domain 1 644 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1253 Sto-Chr5 8494441 8498384 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1253 558 873 Receptor kinase-like Gene Family AT5G38280 50.932 2.18e-105 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto5g1253 Pkinase 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1253 - - cam:101508554 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1253 5 8494441 8498384 Sto5g1253 5 8494441 8498384 ECH