Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1252 ATGTTTGTGAAATTGCCGCAACGAGAAGCACAaccttcctcttctttctcatTTGCTTCACCACTCACTTCGTGCACTGCAAGCAGAGTGAAGAGCATCAAACTCAAACACCAGCAGCTCCAGTTTAAGGCTTTCCTTCTCCCTCCCACCATACACAAGAACCATAATCACTGCGGCCACTTCCATCTTTCTTGTGAAAATAAGAGAGTGAAGATGCTTGAGTTTTTCCCTTCAACTCCTCATTCCATAAAACTCTCTGTCAACTTCATCGATTACACAACCCAACGATTATCCGTTTCTGATCCAAACAGTTGTCTTCCCATTCAACTTCTCAAACTCCATACTTCTTCAATTCACCCTTTCCAATTTCATTCAGATTCGCTATACAAAACACCCACAAATGTTACTATCTTCAACTGTTCTTCAGTACGGTCCACTTACCTGGATAGATATCGTGCGGCACCTTCCTGCCCGATTTGTGCTGTTCCCTACGACAAAAGTGTTGTTCAGACAGACCTCTTTCTCTGTACCAAGATTTTCAGCCTTGTTTCACCAGTAGATCCAACACATCTTTGGCGGAATGAGTTAGAATTAAGATGGTCTAACCCAGAATGTGATGCTCAAAATTTTCACTGCAAGCATAAACATATTAAGCTACCTACTTCAATTATTTTACCCACTTCAGGTTCAATTGTCCTGCTCCTTCTGTCAATTGCTTTCTTTTATGTATACAGATACTTTAGAATGAGAAGAGATGATCAGGCAAGGGTGGACATTTTTTTGAAAGATTACCAGGCACTCAAGCCAACTAGATTCTCTTATGCTGATCTTAAACGGATTACAAATCACTTTAAAAATAAGTTAGGAGAAGGAGCTCACGGATCAGTCTTTAAAGGTAAGCTTTCAAATGAAATATTAGTGGCCGTAAAGATTCTCAATAATTCAGAGCAACATGGGCAAGAGTTCATTAATGAAGTAGGTACCATGGGTAAAATTCATCATATCAATGTGGTTCGCTTGTTAGGCTTTTGTGCTGATGGATTTTACCGAGCTCTTGTTTATGATTTCTTTTCATATGGTTCACTACAAAATTTCATAGCTCCCTTAGACAATAAGGAAATATTCCTTGATTGGGAAAAATTGCAGCAAATTGCTATTGGCATAGCAAGAGGAATTGACTACCTTCATCAAGGTTGTGATCATCGAATTCTTCACTTCGACATCAACCCTCACAACGTCTTACTTGATCagaatttcattccaaaaatttCTGATTTTGGTCTTGCCAAATTGTGTGCTAAAAATCAAAGTACTGTATCAGTGACTGCAGCTAAGGGAACTTTAGGTTATATTGCACCTGAAGTTTTTTCTAGAAACTTTGGGAATGTGTCATATAAGTCAGATATTTATAGTTATGGGATGATGTTGTTAGAAATGATTGGAGGAAGGAAGAATACAAACTCAAGCAAGGAAAGTTTTCAAGTTCTGTACCCAGACTGGATTCATAATTTGATAGAAGGAGGAGACATACACATCAAtattgaagatgaagaagatatgAGAATTGCAAAGAAACTTGCAATAGTTGGACTTTGGTGTATTCAATGGCATCCTGGGAATCGTCCATCTATGAAAATAGTTTTACAAATGCTGGAAGGAGAAGGCGACAGATTAATAGTGCCACCTACTCCTTTTGACTCCACCACTTCTTCTAATACAAGTGCCAAAATACCTACGAGATGTCTGAATTTTGAGTTGGAAGTGATTCATGAATTAGAATGA 1782 0.3732 MFVKLPQREAQPSSSFSFASPLTSCTASRVKSIKLKHQQLQFKAFLLPPTIHKNHNHCGHFHLSCENKRVKMLEFFPSTPHSIKLSVNFIDYTTQRLSVSDPNSCLPIQLLKLHTSSIHPFQFHSDSLYKTPTNVTIFNCSSVRSTYLDRYRAAPSCPICAVPYDKSVVQTDLFLCTKIFSLVSPVDPTHLWRNELELRWSNPECDAQNFHCKHKHIKLPTSIILPTSGSIVLLLLSIAFFYVYRYFRMRRDDQARVDIFLKDYQALKPTRFSYADLKRITNHFKNKLGEGAHGSVFKGKLSNEILVAVKILNNSEQHGQEFINEVGTMGKIHHINVVRLLGFCADGFYRALVYDFFSYGSLQNFIAPLDNKEIFLDWEKLQQIAIGIARGIDYLHQGCDHRILHFDINPHNVLLDQNFIPKISDFGLAKLCAKNQSTVSVTAAKGTLGYIAPEVFSRNFGNVSYKSDIYSYGMMLLEMIGGRKNTNSSKESFQVLYPDWIHNLIEGGDIHINIEDEEDMRIAKKLAIVGLWCIQWHPGNRPSMKIVLQMLEGEGDRLIVPPTPFDSTTSSNTSAKIPTRCLNFELEVIHELE 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1252 593 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 50 593 - -
Sto5g1252 593 Pfam Protein kinase domain 284 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1252 593 ProSitePatterns Protein kinases ATP-binding region signature. 288 310 IPR017441 GO:0005524
Sto5g1252 593 ProSiteProfiles Protein kinase domain profile. 282 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1252 593 Gene3D Transferase(Phosphotransferase) domain 1 358 557 - -
Sto5g1252 593 PANTHER RUST RESISTANCE KINASE LR10-RELATED 50 593 IPR045874 GO:0004672
Sto5g1252 593 Gene3D Phosphorylase Kinase; domain 1 259 356 - -
Sto5g1252 593 SUPERFAMILY Protein kinase-like (PK-like) 264 552 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1252 Sto-Chr5 8489164 8491546 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1252 248 564 Receptor kinase-like Gene Family AT1G66910 47.385 3.57e-99 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto5g1252 Pkinase 5.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1252 - - gmx:100819302 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1252 5 8489164 8491546 Sto5g1252 5 8489164 8491546 ECH