Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1249 ATGGACACGGCAGTTGAAAAAGAAGGTTTAGCCATAGCATCgctttcatatataaataaaaatctaaaaaGATCGAAACGATCTAGAGAGAGAAGGCATCGGCATTCGGAGATGATACCTTGTATGAGGAGAGGGAAAGCCTTAAGCTGGAGCTCCTGGTGTTTGAGTTCGATGCTCTTCACTCTGCTTCTAATGCAAGAAGTGAGCGGTGAAGGTTGTGCATCTAGTTGCGGCAATTTCACAAACATCAAGCATCCATTCCGACTACAAAATGATCCTCCAAACTGTGGGAACCCTAGATACGAGTTAGCCTGCGAGAATAACGTAACGCTACTTCATCTGTTCTCCGGAAAATACAAGGTATTGGGAATCAACTACAACAATTACACAATCCGAATCGTTGATCCCGGGATTCAACAAGATGATTGCTCCTCCCTCCCTCGCTACTTCTTCTATCGACTTAATTTCTCTGATTTTAATGATTACGGGAGTACTACTCCCGAAGATCCATACCGTGCCAGTCTAGATAATTCCCGCGTCTACATGTTCGAGCAGATAATATACTTGAAGTGTAGGAATGGAGTAGTGAGGAAAGAGTATGTGGATACTCCTCCCTGCCTGAATTTGGAGTGGGAAGGCCATGTTTATGCGGTCGTAGGAGACTTAGCGGTTGGAAACCTAACAGATGAGTGTGAAGTGAAATTGGTGGGAAGCATAAGAAGGGATTGGCGTTCGTTGTTAGGCAACGAAAATTGGTCTTACGCTGAGATTGAGAGTGTGTTGTGGTTTGGATTTGAGATATCGTGGTGGCCTGCGGCTTGTAATTGTTCATCTGGAGAAGATTGCCGTTTCGACGGTACCACCCCAACTGTCGAATGCGTGCCAACTCCCCAGTGTCATACTCCCATGGGATACTTGAAGCAGCCTTGCGGACATTTGTCAAAGCTACGCATATTTGCAGAAGTTTATCTCTATGGATTAATCAAAGGATTTGTTCGAATAGGAGGGTGGCATCGACTAGATCCCGACACTGACTACCATTTCGGTCTATCACAGCTTGGATTGGACATGGGAGTAGTCACGGGAGGATACATTATCCCATATACTGTTGTCAGATTTCTATTggATATAGAAGATTTCTTGCAACTTCAAGACCTCATCCCAGTAAGATACTCCTATAAGGACTTGAAGATGATGACCAACGGCTTCAACACCAAGTTAGGACAAGGAGGATTTGGCACTGTTTATCAAGGAAAACTTCGTAGTGGACCTCTTGTAGCTATTAAAATGTTGGGTAAATCTACAGGTAATTGTCAGGATTTTATTAGCGAAGTGGCAACTATCGGAAGAATACACCATTTTAATGTGGTTCATCTTATTGGATTCTGTGTGGAGGGATCAAACCATGCTCTGGTCTATGAATTTATGTATAATGGTTCTcttgataaatatattttctccAAAGAAGGAAGTGCCCCCTTAAATTATACCAAAATATATGAGATATCTTTAGGAATAGCTCGTGGAATTGCTTATCTTCATCACGGTTGTGACATGCAAATTTTACATTTTGATATCAAGCCCCATAACATTCTTCTTGATGACAACTTCAACCCAAAGATATCGGACTTTGGACTTGCAAAGCTGTACCATGTGGATGATAGCATTGTCAATTTAACCGCAGCAAGGGGAACAATAGGGTATATGGCTCCTGAAttgttttacaaaaatattggAGGAGTGTCTTATAAGGCTGATGTTTATAGTTTTGGAATGCTTCTAATGGAATTAGCAAACAGGAGGAGGAACTTGAATTCACAAGCAGAGCACTCAAGCCAAGTTTACTTTCCCTTATGGATATATGATCAATTCGCAGAAGAGGAAGACATAGAAATGGAAGGTTTGACAAAAGAGGAAACAGATTTAGCAAAGAAAATGTTCATAGTAGCTCTATGGTGTATACAATTGAAGCCTAGTGATCGTCCTTCAATGAATAAAGTAGTAGAGATGTTAGAAGGAGAAGTTGAAAGCCTTGAAATGCCTCCAAAGCCTTCTTTGTATCCTCATGAAATTGTTGCTGTGGATCATAAATTCGACTCTGACCAGAGAACTTCCAGTGACTCCATAAATTCTCCTAGTCATAGCAGTGATGTTATTCTTGAGAGTAGCACCAGCAATGGGGAAATggtccctatttactatttagtatttttaGGATTGAGAAAGAGCCATCTTAATAACATAGAGAGTATGAGTTCGGCGACAGAGGGCGGACTTTCGAGGGAGGAAAAAGACCAGGTTGAACGGAGTAGTAAGAAGGTTAAGACTCATGATGAGACAGAAGAGGATATGATTATGGTTACAGATGTGATTGGGTCTAAGGTTCCATCTGATAGTGAGTCTCCTAAGGGCTCGGGGTTTGTCTCTTCCAGAGATAAGCTTACGGGTAATGTCCCTGCTCAAGATGTTGATATGTCTCTATCTGATTCGGAGGAGGAGAGTGATTATGATGATGATTCGAATTCGGATGCCAGTTCGGAGGAGAATGCTTGGGTTCGCATCCCGGGTCTCCCTTTGGAATTCTATAATGTGCACTGCTTACAAAGGATTGGAGGATTGATTGGTCGAACGATCAAAGTTGATCCGACGACATCGCTCACAAGTCGAGGCAAGTTTGCTCGAATTTGTGTCGAGATCAATTTgaaaaagcaacttgttcctcaAGTAGAGGTCAGGGGGCGTAGTTACGCGGTTGAATATGAGGGTTTGCACTTGATTTGTTTTCAATGTGGTCGCTATGGGCATTCTAAGGATTTATGTATGCTGAAGAAGGAGACGGAAGTAAAGGAGAAAACGCAGCAGGTGGACTTGAATATTGTTCCTAAGGATGGAGGGCACGGTGTTGATGACGGTGGAGACATGATTCCGGCGTCGGAGGGTGTAGTTCAGGAAGCTGGGAATGATAATGACGGAGTTTTTGGGCCGTGGATGACGGTGAATCGCCCTAAACGTGGGAAGAATCAGAATCAATTCCCTAAAAGGAATGTTGTCAATAATGGTGTTCAGCCCAATAGATATCAATTCTCTAATCCTATGTTTGACTCAAGACTAAATGGTGGTGGTGGGCCTAAGAGCTTTGCTAGGTCTTCTAGTGTGAATGTTAACCAGCATTTACAAGCCCACTTCCCTCCTTTGCCTAAGAAGCCCACGGAGAATAGAATCCAGAATGGTGTCACATGTGTCCCACGTGAGCCACCTGATAGAAGGGGTCGAAATCGTACTGCTCGTTCTCGTGACGATAGAGCAGTGGCGAACGGTGGACCAACGCCTGTGTATGAAGGATCGGTGGAGGCGAATGACGTTGTGGCAAGTGTTAATGGTGCGATGGCAAGGGCGAGTGACGGCGACGCGGCTGTGGCGTCGCCTCCGGCTCGTGAGGCAGAGGCAATGGCTTCGGGAATGGACGTGGAGGAGCCCAAAGGGGCTCAGTGCTAA 3495 0.4289 MDTAVEKEGLAIASLSYINKNLKRSKRSRERRHRHSEMIPCMRRGKALSWSSWCLSSMLFTLLLMQEVSGEGCASSCGNFTNIKHPFRLQNDPPNCGNPRYELACENNVTLLHLFSGKYKVLGINYNNYTIRIVDPGIQQDDCSSLPRYFFYRLNFSDFNDYGSTTPEDPYRASLDNSRVYMFEQIIYLKCRNGVVRKEYVDTPPCLNLEWEGHVYAVVGDLAVGNLTDECEVKLVGSIRRDWRSLLGNENWSYAEIESVLWFGFEISWWPAACNCSSGEDCRFDGTTPTVECVPTPQCHTPMGYLKQPCGHLSKLRIFAEVYLYGLIKGFVRIGGWHRLDPDTDYHFGLSQLGLDMGVVTGGYIIPYTVVRFLLDIEDFLQLQDLIPVRYSYKDLKMMTNGFNTKLGQGGFGTVYQGKLRSGPLVAIKMLGKSTGNCQDFISEVATIGRIHHFNVVHLIGFCVEGSNHALVYEFMYNGSLDKYIFSKEGSAPLNYTKIYEISLGIARGIAYLHHGCDMQILHFDIKPHNILLDDNFNPKISDFGLAKLYHVDDSIVNLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMELANRRRNLNSQAEHSSQVYFPLWIYDQFAEEEDIEMEGLTKEETDLAKKMFIVALWCIQLKPSDRPSMNKVVEMLEGEVESLEMPPKPSLYPHEIVAVDHKFDSDQRTSSDSINSPSHSSDVILESSTSNGEMVPIYYLVFLGLRKSHLNNIESMSSATEGGLSREEKDQVERSSKKVKTHDETEEDMIMVTDVIGSKVPSDSESPKGSGFVSSRDKLTGNVPAQDVDMSLSDSEEESDYDDDSNSDASSEENAWVRIPGLPLEFYNVHCLQRIGGLIGRTIKVDPTTSLTSRGKFARICVEINLKKQLVPQVEVRGRSYAVEYEGLHLICFQCGRYGHSKDLCMLKKETEVKEKTQQVDLNIVPKDGGHGVDDGGDMIPASEGVVQEAGNDNDGVFGPWMTVNRPKRGKNQNQFPKRNVVNNGVQPNRYQFSNPMFDSRLNGGGGPKSFARSSSVNVNQHLQAHFPPLPKKPTENRIQNGVTCVPREPPDRRGRNRTARSRDDRAVANGGPTPVYEGSVEANDVVASVNGAMARASDGDAAVASPPAREAEAMASGMDVEEPKGAQC 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1249 1164 Pfam Wall-associated receptor kinase galacturonan-binding 73 135 IPR025287 GO:0030247
Sto5g1249 1164 MobiDBLite consensus disorder prediction 1044 1058 - -
Sto5g1249 1164 MobiDBLite consensus disorder prediction 1002 1034 - -
Sto5g1249 1164 ProSiteProfiles Zinc finger CCHC-type profile. 927 940 IPR001878 GO:0003676|GO:0008270
Sto5g1249 1164 MobiDBLite consensus disorder prediction 699 722 - -
Sto5g1249 1164 PANTHER RUST RESISTANCE KINASE LR10-RELATED 63 375 IPR045874 GO:0004672
Sto5g1249 1164 PANTHER RUST RESISTANCE KINASE LR10-RELATED 376 697 IPR045874 GO:0004672
Sto5g1249 1164 Pfam Domain of unknown function (DUF4283) 849 897 IPR025558 -
Sto5g1249 1164 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 63 375 - -
Sto5g1249 1164 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 376 697 - -
Sto5g1249 1164 MobiDBLite consensus disorder prediction 826 844 - -
Sto5g1249 1164 SUPERFAMILY Protein kinase-like (PK-like) 387 672 IPR011009 -
Sto5g1249 1164 SMART serkin_6 401 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1249 1164 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Sto5g1249 1164 Pfam Protein kinase domain 405 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1249 1164 MobiDBLite consensus disorder prediction 758 784 - -
Sto5g1249 1164 MobiDBLite consensus disorder prediction 752 848 - -
Sto5g1249 1164 Gene3D Phosphorylase Kinase; domain 1 380 475 - -
Sto5g1249 1164 ProSitePatterns Protein kinases ATP-binding region signature. 407 429 IPR017441 GO:0005524
Sto5g1249 1164 MobiDBLite consensus disorder prediction 704 722 - -
Sto5g1249 1164 MobiDBLite consensus disorder prediction 1084 1100 - -
Sto5g1249 1164 Gene3D Transferase(Phosphotransferase) domain 1 476 680 - -
Sto5g1249 1164 ProSiteProfiles Protein kinase domain profile. 401 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1249 1164 MobiDBLite consensus disorder prediction 1131 1164 - -
Sto5g1249 1164 MobiDBLite consensus disorder prediction 794 824 - -
Sto5g1249 1164 MobiDBLite consensus disorder prediction 1002 1115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1249 Sto-Chr5 8462958 8474172 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1249 77 687 Receptor kinase-like Gene Family AT5G38260 35.469 2.04e-99 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto5g1249 Pkinase 5.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1249 - - gmx:100305367 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1249 5 8462958 8474172 Sto5g1249 5 8462958 8474172 ECH