Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1247 ATGAAGAACATCAAACGTCATACCTCGCCGCCGGCGACGGGCATCCGGCAAATGGACGCCGGCGAAACAAAGGCCTTGTGCCAGGAGACTCTTACGAAATTCAAGAATGCTCGCCAGAGGAGGCTCAAAATCCGGCGATTGAAGTATATCTGTGAAGCGAAAATCCACGTCGCGTCCGGAGATCGGAGGGAGGAGAGGAATAAGCGTGTGGAGTCGGGTAGTAAGGATAGAGAGATTCACGAGTCGATGGAGATATCGTTGTCGTTGACGACGTCGTCGTCGCGGGAGAAGGAGGATCGGTCATCTTTGGCGGAGAAATACGAAGAGATGAATGGCGGCGATCTGGAGGAGTTGCCGTACGGTTCGGTGTCGGTGATAGGTAGTAGGAAGGAGATGGAAGATGCGGTGAGCATAGAGATGGGATTCGTAGTGAAGGAACGAGTGAAGTGTGACTTCTTCGCAGTCTACGATGGTCACGGTGGGTCACAGGTGGCGAAAGCGTGCCGTGAGCGGTTGTACCAATTGGTTGCGGAAGAAGTAGAAAGGCATGGGAAGAGTGGTAGTGAAGTGGATTGGGCGGGAATGATGGAAGGGTGTTATGGTAAAATGGATAGAGAGTTGGCGGATAATGCGGCGCTACGGACGGTGGGTTCAACGGCGCTTGTGGCTGTTGTAGGAAAGGAGGAGGTGGTTGTGGCTAATTGTGGTGATTGTAGGGCGGTGATGGGAAGAGGAGGTGAGGCCTTCGCCTTGTCTAATGATCATAAGCCCGACAGACCTGACGAGTTGATGCGAATTGAAGCTGCTGGTGGAAGGGTCATCAACTGGAATGGCCAACGTGTTCTAGGAGTTCTTGCTACCTCCAGATCTATAGGTTAG 879 0.5279 MKNIKRHTSPPATGIRQMDAGETKALCQETLTKFKNARQRRLKIRRLKYICEAKIHVASGDRREERNKRVESGSKDREIHESMEISLSLTTSSSREKEDRSSLAEKYEEMNGGDLEELPYGSVSVIGSRKEMEDAVSIEMGFVVKERVKCDFFAVYDGHGGSQVAKACRERLYQLVAEEVERHGKSGSEVDWAGMMEGCYGKMDRELADNAALRTVGSTALVAVVGKEEVVVANCGDCRAVMGRGGEAFALSNDHKPDRPDELMRIEAAGGRVINWNGQRVLGVLATSRSIG 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1247 292 Pfam Protein phosphatase 2C 121 292 IPR001932 -
Sto5g1247 292 Gene3D - 116 292 IPR036457 -
Sto5g1247 292 PANTHER ALPHABET, ISOFORM E-RELATED 41 292 - -
Sto5g1247 292 MobiDBLite consensus disorder prediction 60 108 - -
Sto5g1247 292 MobiDBLite consensus disorder prediction 1 20 - -
Sto5g1247 292 ProSitePatterns PPM-type phosphatase domain signature. 152 160 IPR000222 GO:0043169
Sto5g1247 292 MobiDBLite consensus disorder prediction 93 108 - -
Sto5g1247 292 CDD PP2Cc 120 292 IPR001932 -
Sto5g1247 292 PANTHER PROTEIN PHOSPHATASE 2C 51-RELATED 41 292 - -
Sto5g1247 292 SMART PP2C_4 108 292 IPR001932 -
Sto5g1247 292 ProSiteProfiles PPM-type phosphatase domain profile. 119 292 IPR001932 -
Sto5g1247 292 SUPERFAMILY PP2C-like 118 292 IPR036457 -
Sto5g1247 292 MobiDBLite consensus disorder prediction 60 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1247 Sto-Chr5 8454275 8455389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1247 120 292 PP2C-type Phosphatase Gene Family AT1G07430 48.958 3.54e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1247 K14497 - gmx:100807235 327.405