Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1242 ATGGTTTACAGCAGTTGTATAAGGTCTTTGGTTGTTGAAGTTGGAACCTTCACCAATAAAGTGCAACTCCACAGCATTGTGAGAAGTTTGCATAAAGTTCCCTCCATTACTTATTCGTGGAATCGTGGATTTAAGACAAGCATAGGGATGATGGTTGATACAGGTGCTATGTCAAGAGCTGGACCCATTGTTGATATGTTGCCAGagaaagatgatgatggtgggTTTGCCAGTGGAGGGTGGAAAAGTGAAGATGGAAGACTTAGCTATGGCTATTCAAGTTTTAGAGGAAAAAGAGTGACTATGGAGGATTTCTATGATATTAAGATATCAAATATTGATGGTCGATCAGTATGCTTGTTTGGAATATTTGATGGTCATGGTGGTTCTCGTGCCGCTGAGTATTTGAAGGAGCACCTCTTTGATAACCTCATGAAGCATCCAGCGTTTTTGACAGATACTAAATTGGCTATAAGTGAAACATATCGACAGACTGATGCTGATTTTCTGGATTCTGAAAGAGATACTTTCCGGGATGATGGTTCTACTGCTTCGACTGCAGTTTTGGTTGATAACCATCTCTATGTCGCCAATGTTGGAGATTCTAGGACTATAATATCAAAAGCTGGAAAAGCGATAGCTCTATCTGAGGATCATAAGCCAAATAGAAGTGATGAGCGGAAGAGAATAGAAAATGCTGGGGGTGTTGTCATGTGGGCAGGTACTTGGAGGGTAGGAGGTGTACTAGCAATGTCCCGAGCTTTTGGTAACCGTATGTTGAAGCAGTTTGTTGTGGCAGAACCTGAGATCCAGGACCAGGTGATAGATGAAGAGCTCGAGCTGCTGTTGCTCGCAAGCGATGGACTATGGGATGTCGTACCAAATGACGATGCTGCTTCTCTTGCGCGCACTGAAGATGAACCTGAAGCAGCAGCACGGAAGTTAACTGAAGCTGCCTTTGCTCGTGGTAGTGCAGATAACATTACATGCATTGTggttcacttccatcatgagaAAGCAAACCCAGCTAATCCTGACCAAGCAAGTCCAGGATCCAGCTAG 1062 0.42 MVYSSCIRSLVVEVGTFTNKVQLHSIVRSLHKVPSITYSWNRGFKTSIGMMVDTGAMSRAGPIVDMLPEKDDDGGFASGGWKSEDGRLSYGYSSFRGKRVTMEDFYDIKISNIDGRSVCLFGIFDGHGGSRAAEYLKEHLFDNLMKHPAFLTDTKLAISETYRQTDADFLDSERDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDQVIDEELELLLLASDGLWDVVPNDDAASLARTEDEPEAAARKLTEAAFARGSADNITCIVVHFHHEKANPANPDQASPGSS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1242 353 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Sto5g1242 353 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 42 347 - -
Sto5g1242 353 PANTHER ALPHABET, ISOFORM E-RELATED 42 347 - -
Sto5g1242 353 CDD PP2Cc 89 335 IPR001932 -
Sto5g1242 353 Gene3D - 81 342 IPR036457 -
Sto5g1242 353 ProSiteProfiles PPM-type phosphatase domain profile. 89 335 IPR001932 -
Sto5g1242 353 SMART PP2C_4 79 333 IPR001932 -
Sto5g1242 353 SUPERFAMILY PP2C-like 85 336 IPR036457 -
Sto5g1242 353 Pfam Protein phosphatase 2C 90 328 IPR001932 -
Sto5g1242 353 SMART PP2C_SIG_2 84 335 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1242 Sto-Chr5 8391313 8394880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1242 1 339 PP2C-type Phosphatase Gene Family AT5G53140 70.455 2.85e-180 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1242 K17506 - gmx:100805795 578.17