Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1241 ATGATGGATTGCAACAAAGACGAGGCTGTTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCAGACAGGGAATATGCTGGTGCCAAGAAATTTGCTGTCAAGGCTCTAAATTTGTATCCTGCACTGGATGGTCTTTCACAGTTTTTGACAACTCTTGATGTTTACATTGCTGCTGAGAATAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAACCCTTTTGACGATGAAGAGACAGTTAGAAAACAGTACAGAAAGCTGGCTCTCACTCTTCACCCAGATAAAAACAAGTCTTTGGGTGCAGAGGGTGCATTTAAGCTGGTTTCGGAGGCATGGAGTTTGTTGTCTGATAAAACCAAGAGACTAGAATATAACCAGAAGCGGAGTGTGAAAGGTTTTCAACAGAAAACTCCGAATCATGGGGGGTCCCAATCTGAAGTACCTAGTTCAAAtggtttttataattttaacaaGAATGTAACTTCGAACATGAGGACTGGAAATAGTAATGCTCAGGCTCGTCACACCTCAGCTCCTCGTCCACAGAAAAAAGCTGACACCTTTTGGACTATTTGTAATAGGTGCAGGACGCATTATGAATATCTCAGGATTTATTTGAATCATAGACTACTATGTCCCAATTGTAATGAGGCTTTCTTGGCTATAGAGAAGGATCCACCTCCCAATTACTTTAAGTCCACAAATTGGTCTTCTCGCCAACAGCATCAGAGTTCTCGACAGCATGCTTCCAGTGGTTCTTCAGGCATGTCATCGGTCAGTAAAACAAGCTTTCAGTGGGGTCCTCACTCTAGCACAGCTGGTTTTGGTCGCATGGATGGATCATCATCTGTTGCTTCTCAAGCTGCAAGTGTTGTGCAGCAGGCAAGTGAGAAAGTGAGAAGAGAACGTGAGGGAGCACCATCAATTGCTGAATGGGAGAGGAGTCAAATATCCAAGAGGACTGATggttttttcaataaagtggataaaactTTGAAGAAGAGGAGGACAGATGATACTTATATGAATGGTATTAAAGGATACATGGCAAATCATACGGCCATGGGACATGGAGCAGCTGGTACTGATTCAAGAAAAGCAAACTGGGAAACAGAAAGAAGCTATGGCTTTTCAAGCATGAAGCCTAACAGTACGAGGGAGTTGTCATTGTTTGAAATCCGAAACATGTTGATGGATAAGGCACAGACTGAACTTCGCAAGAAACTTGAAGAATGGAGATCAATGGCTCAATCTAAGATCACAAACAAGTCCAAAGAGAATAAGGGACTAAAAAGCACGTCGCATAAAAAGTCCATTCTGGATAACAGCGTGTATGTAGAAGGTGATTCTCTCCCTGTCACATCTGATAATGCAGTTAAGGAGGACCAAACCTATGTTACAATCAATGTTCCTGACCCTGATTTCCACAATTTTGACTTGGATAGAGATGAAAATTCCTTTGGTGAGGACCAGGTCTGGGCTGCTTATGATGACGATGATGGAATGCCTCGATATTATGCTCGAATCTACAAGGTGATATCCTTGAAGCCATTTAGAATGAAAATCAGTTGGCTTAACTCTAGAAGCAACAGTGAATTGGGTCCAATAGATTGGGTAGGTGCTGGTTTTACCAAAACTTGTGGGGACTTTAGGACTGGCAGGCATGAAATAACTGAATCACTGAATTCATTTTCGCACAAGGTTAGGTGGACAAAAGGCAACAGAGGAGTTATACGCATCTTTCCTGTAAAAGGGGAAGTCTGGGCTCTTTATAGAAACTGGTCTCCTGATTGGAGCCAACATACTCCAGATGATGTGATACACAAGTATGATATGGTGGAGGTGCTTGAAGATTTTACTGAAGAGCAAGGTGTATTAGTTACCCCACTGATTAAACTTGATGATTTCAGGACCGTGTTTCGCAGGCAGACGGACCCTGATCGGGTGAAGAAGATTCCGAAAGAGGAGATGTTTCGCTTCTCTCATCAGGTTCCTAATTACATACTCACAGGTCAAGAAGCTGATAATGCTCCGAAGGGTTGTCGAGAGTTGGATCCAGCAGCTACACCCTTGGACCTCCTGCAGACAGCAGAAGCTAATGAGAGATCCAATAATGTTACGAAGCCGGAGGAAGACACATTGTCCAATTCACCTGAAATGGAGGAGAATGCTTCAGAAACTAGAAGAGAACCGTTTGATACTCTATGCAAAGGTGTTATAAATTGTTGCAAGTTTCGAAATTGCACTGTTTTACCGCATTTGATTGAActttaa 2283 0.4174 MMDCNKDEAVRAKEIAERKFSDREYAGAKKFAVKALNLYPALDGLSQFLTTLDVYIAAENKVSGEMDWYGILGVNPFDDEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSVKGFQQKTPNHGGSQSEVPSSNGFYNFNKNVTSNMRTGNSNAQARHTSAPRPQKKADTFWTICNRCRTHYEYLRIYLNHRLLCPNCNEAFLAIEKDPPPNYFKSTNWSSRQQHQSSRQHASSGSSGMSSVSKTSFQWGPHSSTAGFGRMDGSSSVASQAASVVQQASEKVRREREGAPSIAEWERSQISKRTDGFFNKVDKTLKKRRTDDTYMNGIKGYMANHTAMGHGAAGTDSRKANWETERSYGFSSMKPNSTRELSLFEIRNMLMDKAQTELRKKLEEWRSMAQSKITNKSKENKGLKSTSHKKSILDNSVYVEGDSLPVTSDNAVKEDQTYVTINVPDPDFHNFDLDRDENSFGEDQVWAAYDDDDGMPRYYARIYKVISLKPFRMKISWLNSRSNSELGPIDWVGAGFTKTCGDFRTGRHEITESLNSFSHKVRWTKGNRGVIRIFPVKGEVWALYRNWSPDWSQHTPDDVIHKYDMVEVLEDFTEEQGVLVTPLIKLDDFRTVFRRQTDPDRVKKIPKEEMFRFSHQVPNYILTGQEADNAPKGCRELDPAATPLDLLQTAEANERSNNVTKPEEDTLSNSPEMEENASETRREPFDTLCKGVINCCKFRNCTVLPHLIEL 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1241 760 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Sto5g1241 760 SUPERFAMILY Chaperone J-domain 63 158 IPR036869 -
Sto5g1241 760 SMART dnaj_3 66 123 IPR001623 -
Sto5g1241 760 MobiDBLite consensus disorder prediction 299 316 - -
Sto5g1241 760 MobiDBLite consensus disorder prediction 700 724 - -
Sto5g1241 760 MobiDBLite consensus disorder prediction 132 180 - -
Sto5g1241 760 CDD DnaJ 67 120 IPR001623 -
Sto5g1241 760 Pfam Domain of unknown function (DUF3444) 470 676 IPR024593 -
Sto5g1241 760 PRINTS DnaJ domain signature 69 87 IPR001623 -
Sto5g1241 760 PRINTS DnaJ domain signature 87 102 IPR001623 -
Sto5g1241 760 PRINTS DnaJ domain signature 103 123 IPR001623 -
Sto5g1241 760 MobiDBLite consensus disorder prediction 132 186 - -
Sto5g1241 760 Pfam DnaJ domain 67 128 IPR001623 -
Sto5g1241 760 PANTHER HEAT SHOCK PROTEIN-LIKE 2 712 - -
Sto5g1241 760 MobiDBLite consensus disorder prediction 297 316 - -
Sto5g1241 760 MobiDBLite consensus disorder prediction 234 266 - -
Sto5g1241 760 Gene3D DnaJ domain 64 177 IPR036869 -
Sto5g1241 760 PANTHER BNAC03G44070D PROTEIN 2 712 - -
Sto5g1241 760 MobiDBLite consensus disorder prediction 700 732 - -
Sto5g1241 760 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1241 Sto-Chr5 8383434 8386164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1241 5 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.051 5.21e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1241 - - gmx:100814722 1014.99