Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1240 ATGGGATTCCAAACACCTCACGCTAGTAAACCGAAAGTGCAACCTGTTAACAAGCCCATTCCTTCAACATACGATGCATGGGTGGCGAGACACCCTTCGGCATTGCGCACATTTGATAGATTAATGAAAGCAGCGAGTGGGAAGGACGTGGTGGTGTTTCTAGACTATGATGGTACCTTATCGCCCATTGTGGATGACCCTGATCGCGCTTTTATGTCTCACGAGATGCGTGAAGCAGTACGTGAAGTTGCTAAAAATTTCCCAACAGCAATAATTAGTGGAAGAAGCAGGGACAAGgtgAAAGAATTTGTGAAGTTAAGTAATGTGTATTATGCTGGAAGCCATGGGATGGACATAATGGCACCATCAATGCCAGTTAGATCTTCTGATGGCAACCGCTATACCATGGCCCTTGACTCAACAAAGGGCAATGGAGTTCCCTTTCAACCTGCGAAGAGGTTTCTGCCCGCAACTCGAGAGCAGATATTGAAAGAATTAGAGAATAAAACAAAAGACATAAAGGGTGCAAGGGTGGAGGACAATGGGTTCTGTATGTCTGTACATTTTCGCCAGGTCCAAGAAGAGGATTATGGCGTATTAGAAGAGAAGGTGAAGTCTGTGCTTGAAAAACATCCAGACTTTTGCTTAACTGAGGGCAAAAAGgtTATGGAAATAAGGCCATCCATAGAATGGAATAAAGGTCATGCCCTGGAGTATTTTCTTGACACACTAGGGTTAAGCAGTTCCAGCAATATTCTTCCTGTGTATATCGGTGATGATCGAACCGATGAAGATGCTTTTAAGGTGCTACAGAGTAGAGGACAAGGTTATCCAATTATAGTGTCTTCCGTTCCCAAGGACACAAAAGCTTTGTACTCTTTGAGAGACCCTTCagaagttttaattttcttgtcacGGCTGGCAAAATGGAAGAAGACCACATGCTCAAGCAGGCCTTTGAATTTTGGTTAA 972 0.427 MGFQTPHASKPKVQPVNKPIPSTYDAWVARHPSALRTFDRLMKAASGKDVVVFLDYDGTLSPIVDDPDRAFMSHEMREAVREVAKNFPTAIISGRSRDKVKEFVKLSNVYYAGSHGMDIMAPSMPVRSSDGNRYTMALDSTKGNGVPFQPAKRFLPATREQILKELENKTKDIKGARVEDNGFCMSVHFRQVQEEDYGVLEEKVKSVLEKHPDFCLTEGKKVMEIRPSIEWNKGHALEYFLDTLGLSSSSNILPVYIGDDRTDEDAFKVLQSRGQGYPIIVSSVPKDTKALYSLRDPSEVLIFLSRLAKWKKTTCSSRPLNFG 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1240 323 CDD HAD_TPP 51 300 - -
Sto5g1240 323 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 17 318 IPR044651 GO:0004805|GO:0005992
Sto5g1240 323 SUPERFAMILY HAD-like 51 311 IPR036412 -
Sto5g1240 323 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 17 318 - -
Sto5g1240 323 TIGRFAM T6PP: trehalose-phosphatase 49 309 IPR003337 GO:0003824|GO:0005992
Sto5g1240 323 Coils Coil 159 179 - -
Sto5g1240 323 Pfam Trehalose-phosphatase 53 298 IPR003337 GO:0003824|GO:0005992
Sto5g1240 323 Gene3D - 50 144 IPR023214 -
Sto5g1240 323 Gene3D - 146 318 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1240 Sto-Chr5 8370354 8372576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1240 48 313 Trehalose Biosynthesis Gene Families AT4G17770 26.596 3.36e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1240 K01087 - gmx:100809194 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1240 5 8370354 8372576 Sto5g1240 5 8370354 8372576 ECH