Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1224 TTGTTCTCCAAACCCATAGCCACACACTCTTCAGGACCCCCAGCATCTGCTTCCTTTCTCTTTGATTTCAATCCCAATATTCTTCTCTCCACCGCGCAACCACTGTTTTCCTATAGAAATTTCAAGGAAGGCCGGGCCTATTTGTTTCGACAAGAGTACACTGTGTTTGGAATAGAAGTCATGGAACAGAGTATCCTATGCAAATACACTGTGCATCGCAGCGTTACCAAAAAGCACACGAAGCCAGGGTCATCTAAGAAGGCCTCCGATGCCCACAATCCGTCAGAGCCGAGAGTTGTACGGATATCAGTCACCGATCCAGATGCCACTGATTCCTCCAGCGACGAGGAAGGAGAGTACTGTTTCAGTCGTCAGAGGGTGAAGCGTTACGTGAACGAGATTAACATCGAAGCCAGTTGCAAGAACGCGGCACTCCCCAATCCCCGAAAGAGGTCCGCCGGAGAAGGTCCGTCGTGCCGGCGGCCGGTGAAGGTTTCTGCTACAAACAACGGCAGGAAGTTCCGTGGAGTACGGCAAAGACCCTGGGGGAAATGGGCGGCTGAGATTCGAGATCCCGCGCGACGTGTGCGTGTGTGGCTAGGCACCTTCGACACTGCGGAGGAAGCAGCAATGGTTTATGATAATGCAGCGATTAAGATTCGAGGACCCGATGCTTTAACAAATTTTGTGACACCACCGCCGAGGGAAAAGGCGGAGGAAGCCGAAGTGGTGGTAGTGAAGCCGGAAATCAATGTTGAGGTGAAGTCAGAAGCGTCAGGGTCCGGCTACGATTCCAGCGAGGAGTCGCATCGTCTATCATCACCCACATCGGTGCTGCAATTCAGAAGCAATTGCAGCGAGGAAACCGAACCGCAGAAGGCAAACGAACCGGAGGCAGTGGCAGAGACGGTGGGAGCAGTGGAAGTGGAAGAGGTGTTCCGGGAGTGTGTAGGAGAAACGAATTTGTTGGAGGAGAAGGTAGATTACTTCGGGTTCGACATGCCAAATTGGGAGGAAGTGTTCAATTTTTCGACGCCACAATACTCATTACTGTTTGAAGAACCTCCACAGTTAATGAACGAAACGACGACGATCTTACCGGAGGAAGATTTCAACGTGGACGATTGGATTGTTGGGGATTCAGAGATGGAGCTGGAGAAACCGTACTCGCCATCAACGCTGTGCCAAACGGACGATTACTTCCAAGACATTTTGTTAGGATCAGATCCTCTGGTCGTGCTGTGA 1245 0.5133 LFSKPIATHSSGPPASASFLFDFNPNILLSTAQPLFSYRNFKEGRAYLFRQEYTVFGIEVMEQSILCKYTVHRSVTKKHTKPGSSKKASDAHNPSEPRVVRISVTDPDATDSSSDEEGEYCFSRQRVKRYVNEINIEASCKNAALPNPRKRSAGEGPSCRRPVKVSATNNGRKFRGVRQRPWGKWAAEIRDPARRVRVWLGTFDTAEEAAMVYDNAAIKIRGPDALTNFVTPPPREKAEEAEVVVVKPEINVEVKSEASGSGYDSSEESHRLSSPTSVLQFRSNCSEETEPQKANEPEAVAETVGAVEVEEVFRECVGETNLLEEKVDYFGFDMPNWEEVFNFSTPQYSLLFEEPPQLMNETTTILPEEDFNVDDWIVGDSEMELEKPYSPSTLCQTDDYFQDILLGSDPLVVL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1224 414 Gene3D AP2/ERF domain 172 231 IPR036955 GO:0003700|GO:0006355
Sto5g1224 414 ProSiteProfiles AP2/ERF domain profile. 173 230 IPR001471 GO:0003700|GO:0006355
Sto5g1224 414 MobiDBLite consensus disorder prediction 77 118 - -
Sto5g1224 414 SUPERFAMILY DNA-binding domain 173 230 IPR016177 GO:0003677
Sto5g1224 414 PRINTS Ethylene responsive element binding protein signature 174 185 IPR001471 GO:0003700|GO:0006355
Sto5g1224 414 PRINTS Ethylene responsive element binding protein signature 196 212 IPR001471 GO:0003700|GO:0006355
Sto5g1224 414 SMART rav1_2 173 236 IPR001471 GO:0003700|GO:0006355
Sto5g1224 414 CDD AP2 173 229 IPR001471 GO:0003700|GO:0006355
Sto5g1224 414 Pfam AP2 domain 173 222 IPR001471 GO:0003700|GO:0006355
Sto5g1224 414 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 64 292 - -
Sto5g1224 414 MobiDBLite consensus disorder prediction 258 288 - -
Sto5g1224 414 MobiDBLite consensus disorder prediction 146 165 - -
Sto5g1224 414 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF4-LIKE 64 292 - -
Sto5g1224 414 MobiDBLite consensus disorder prediction 256 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1224 Sto-Chr5 8244548 8246140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1224 67 413 AP2-EREBP Transcription Factor Family AT4G27950 41.389 1.01e-63 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto5g1224 AP2 5.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1224 - - lang:109327510 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1224 5 8244548 8246140 Sto5g1224 5 8244548 8246140 ECH