Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1219 ATGGGAAAGAAACTGGatatcttgttgattttctcAGCAGCCTTCATGATTGGAGCAATGTTCGTGAGTATTGGGGCTGAGCCCGTGCAAGATAAACAAGCTTTGCTCGATTTCCTTAGTAACATAGGTCACTCTCATCCTCTCAACTGGGATAGGAATTCTTCTGCGTGTAAAAGCTGGAGAGGAGTGTTTTGCGACAAGGAAGAATCCAGAGTCATAGCCCTCCGATTACCCGGAGCTGGATTGCGAGGTCCAATTCCGTCAAACACTCTTAGTCGCCTCTCAGCACTTGAGACTCTAAGTCTCAGATCCAACACTATAACGGGTCCTTTTCCTTCTGATTTCTCTGAGCTTAAAAATTTGACCTATCTTTATCTCcaatttaataagttttctgGTCCATTGCCGTTGGATTTTTCTGTTTGGAAGAATCTTATTGTTGTTAACTTATCCAACAACTCTTTCAATGGAAGCATCCCTTCTTCCATTTCGAAATTGACACAGCTCACGTCTTTAGTCCTTGCCAACAACTCTCTTTCTGGGGAGATTCCTGATCTCAATATTCCAAGCCTGCAAGAGATTAATTTAGCTAACAATAACTTTAGTGGGGTTGTGCCTAGATCACTTCAGAGATTCCCAAATTCGGCTTTTGCTGGTAATAATCTTACATCAGAAAGTGCACTCCCTCCAGCTTTTCCAGCTCGACCACCAAATGCTTCTCCTCCAACGAAGAAAACCACTCTTAGTGAACCAGCGTTATTGGCTATCATCCTTGGTGGTTGTGTGCTATTGTTTGTGCTAATTGCAGCTTTCATGCTCGTGCGGTTCTATGGAAAAGGAGATGATGGCGAGGGGCTACCAGTGAAGTCCAAGAAAAAAGAAGGCCCTCTGAAAAAAGAAGCATCCGAGACAGAAAGTCAAGACAAGAACAAGATAGTGTTCTTTGAGGGTCGCAATCTAGCGTTTGACCTGGAGGACCTGTTGAGAGCATCTGCTGAGGTGCTAGGAAAGGGGACATTTGGAACAGCATATAAGGCTGCTCTAGATGATGTAACTACGGTGGTGGTGAAGAGATTGAAGGAAGTCACCGTTGGAAAACGCGATTTTGAACAGCAAATGGAGGCGGTAGGGAGGATCAGGCACGACAATGTAGCTCCACTAAGAGCATATTATTATTCCAAGGAAGAGAAACTTATGGTGTATGATTACTACCAACAGGGTAGCATTTCTGCAATGTTGCATGGTAGAAGAGGAGAAGGCAGGAGTACCTTAGACTGGGATAGCCGACTGAGAATTGCAATAGGTGCAGCAAGAGGGATAGCTCACATCCACACACAACATGGAGGGAAACTAGTGCATGGAAACGTAAAAGCCTCAAACATCTTCCTCAACTCCCAAGGGTATGGATGTGTTTCTGACACGGGTTTGGCCACATTGACGAATTCAATACCCATACCAGCACAGAGAACTGGAGGGTACCGTGCCCCAGAAGTAACAGACAGCCGAAAGGCAAGCCATGCATCTGATGTGTACAGTTTCGGGGTGTTGGTGCTGGAGCTTCTGACAGGGAAGTCACCGGTACATGCCAGTGGAAGTGAAGAAGTGGTGCATCTGGTTAGGTGGGTGAATTCTGTGGTGAGAGAGGAGTGGACTGCGGAGGTGTTTGACGTTGAGTTACTGAGATATCCGAATATAGAGGAAGAAATGGTAGAGATGTTACAGATTGGTATGGCTTGTGCAGTAAGGATGCCAGAGCGGAGACCCAAAATGCAAGATGTTTTGAGAATGATAGAGGAAATTCGTAAAGTAAATACTGGAACCCAACCATCCACAGAAGATTCTACTCCAAATCAACCTCCAGTTGATgcaccttcttcctctctcccaCAATGa 1893 0.44 MGKKLDILLIFSAAFMIGAMFVSIGAEPVQDKQALLDFLSNIGHSHPLNWDRNSSACKSWRGVFCDKEESRVIALRLPGAGLRGPIPSNTLSRLSALETLSLRSNTITGPFPSDFSELKNLTYLYLQFNKFSGPLPLDFSVWKNLIVVNLSNNSFNGSIPSSISKLTQLTSLVLANNSLSGEIPDLNIPSLQEINLANNNFSGVVPRSLQRFPNSAFAGNNLTSESALPPAFPARPPNASPPTKKTTLSEPALLAIILGGCVLLFVLIAAFMLVRFYGKGDDGEGLPVKSKKKEGPLKKEASETESQDKNKIVFFEGRNLAFDLEDLLRASAEVLGKGTFGTAYKAALDDVTTVVVKRLKEVTVGKRDFEQQMEAVGRIRHDNVAPLRAYYYSKEEKLMVYDYYQQGSISAMLHGRRGEGRSTLDWDSRLRIAIGAARGIAHIHTQHGGKLVHGNVKASNIFLNSQGYGCVSDTGLATLTNSIPIPAQRTGGYRAPEVTDSRKASHASDVYSFGVLVLELLTGKSPVHASGSEEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIGMACAVRMPERRPKMQDVLRMIEEIRKVNTGTQPSTEDSTPNQPPVDAPSSSLPQ 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1219 630 ProSitePatterns Protein kinases ATP-binding region signature. 335 366 IPR017441 GO:0005524
Sto5g1219 630 Pfam Protein tyrosine and serine/threonine kinase 333 595 IPR001245 GO:0004672|GO:0006468
Sto5g1219 630 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Sto5g1219 630 PANTHER OS05G0588300 PROTEIN 15 617 - -
Sto5g1219 630 PANTHER LRR RECEPTOR-LIKE KINASE 15 617 - -
Sto5g1219 630 MobiDBLite consensus disorder prediction 285 304 - -
Sto5g1219 630 Pfam Leucine rich repeat 87 131 IPR001611 GO:0005515
Sto5g1219 630 Pfam Leucine Rich Repeat 144 166 IPR001611 GO:0005515
Sto5g1219 630 Pfam Leucine Rich Repeat 190 211 IPR001611 GO:0005515
Sto5g1219 630 MobiDBLite consensus disorder prediction 603 621 - -
Sto5g1219 630 SUPERFAMILY L domain-like 41 214 - -
Sto5g1219 630 Gene3D Transferase(Phosphotransferase) domain 1 405 618 - -
Sto5g1219 630 ProSiteProfiles Protein kinase domain profile. 329 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1219 630 Gene3D Ribonuclease Inhibitor 29 234 IPR032675 -
Sto5g1219 630 SUPERFAMILY Protein kinase-like (PK-like) 333 598 IPR011009 -
Sto5g1219 630 Gene3D Phosphorylase Kinase; domain 1 296 403 - -
Sto5g1219 630 MobiDBLite consensus disorder prediction 602 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1219 Sto-Chr5 8213616 8215597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1219 26 612 Receptor kinase-like Gene Family AT4G23740 56.126 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto5g1219 PK_Tyr_Ser-Thr 9.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1219 - - gmx:100813065 894.419