Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1214 atggaagagaaGAGAGGTGAAGCTTCAAAGACAGTGAATGATGCTGCTGCTAATTTCACTTCACTGAGAATGCACAGCTTTGACAAGAGAGTGGTTGAGAACAAGTGCAGTAGTGGAAATGGCATACGCAAAACCAAATCACTAAATGCTCAATTCTTGATCAACATTGATGAACTAATGATATCTAACAAGATTGATTCCAATACTAATGAAATCAGGTATTCCCTTTCGCTCACTGCACCAACCTTACTCTCAGACCAACTCTCTGATGTCCTCAACCTCCCTACTACTCCCAAATGCAAAGAGGAGGAACCTGCAAGTCCATGCAAGTTGGCAAGATTACACATGGAACCTACCATGCCAATATATCTCAAGTTTGAAGATGTGAAATACAAGGCATCTACAAAAGGTGTCAAGTGTACTTCAGAAGAAGAGAAGTTCATTCTGCATGGGATCACTGGTTCAGTAAGACCAGGGGAGATCCTTGCTCTTATGGGGCCATCAGGAGGTGGTAAAACAACATTGCTCAATATCTTAAGTGGAAGGATCAAACTTGACAGTGGTTCCATCACTTATAATGACAAACCTTATACCAAATCACTGAAGCAGAGGATTGGGTATGTGACACAAGATGATGTTGTGTTCCCTCATCTTACTGTAAAGGAAACTCTCACTTATGCAGCTTTGCTCCGTCTTTCCAAGAATCTATCAAGAACGCAGAAGAAAGAGAGGGCTATGAATGTTTTGAGTGAGCTATGCCTCGACAGGTGTCAAGACACAATAATTGGAGGCAAATTCATTCGAGGTGTTTCTGGGGGTGAGAGAAAAAGGGTCTGCATAGCCACTGAAATCCTGCTCAACCCATCGCTTCTCTTCTTAGATGAACCAACCTCTGGTCTTGATTCAACAACAGCATCAAGAATTGTCCAGATTCTTCACAATATTGCAAAaGAGGGAAAGACAGTGGTGACAACAATACACCAGCCATCAAGTAGGCTGTTCAGCATGTTTGACAAGCTGATTCTGTTGGGTAAAGGGAGCACCTTGTACTTTGGAGAAGCATCTGATGCAATGATGTATTTCTCCTCCATTGGTTGTTCTCCATTGATATCCATGAACCCTGCGGAATTCCTCATTGACCTTGCAAATGGCAACATGAATGACAAATCTGTCCCTTCAGAACTTGAGGATAAATTCCACTATGCCATCACCACCAAACTTGACACAAAACACaatcataaaaataatgaaCTCTCCCCACTGGATGTCCATGAGTTTCTTGTGGAGGCCTATGAAGTAAGACTCAAAGAAAGGGAGAAAACAAGGCTTCTTGAGCCTGTGATAATGATAGGAGAGAATGGGAATCAAGGAAGGCCATTCATAAGGGACTTTGGAGCAACATGGGCAGAGCAATTTTGCATTCTGTTCAGAAGAGGCATAAGGGAGAGGCGTCATGAGTACTTCAGCAGTGTGCGTGTGACACAAGTAATATCAACAGCTATAATTGTAGGACTACTTTGGTGGCACCCtggtgcttcttcttcttctccaaagaCTATTCAAGATCAGGCAGGACTACTGTTTTTTCTTTCAGTATTCTGGGGATTTTACCCTCTATTCACTGCCATTTTCATGTTCCCACAAGAAAGAGCAATGCTAGTGAAAGAGAGATCAATAGGAATGTACAAGCTCAGCGCATACTTCTTTGCTAAAAACATCAGTGATATCCCATTGGAGCTTCTAATGCCTACAGTCTTCCTGGTGATTATGTACTTCATGGTTGGCTTGAACTCACAATTCTCTGCATTTTTCCTCACCATGCTCACTGTTTTTCTCAGCGTTCTGGCTGCTCagGGTCTAGGACAAAGCATAAGTGCAGCATTTCTAGATGTGAAGAAAGCAACAACATTGGCTTCAATCACTGTCATGACCTTTATGCTGACTGGTGGATTCTTTAGCGAAGGAGTCCCAAAGTTTATGTCGTGGGTGCGCTACGTGTCATTCAACTACCACACATATAGGTTGCTTCTGAAAATTCAGTATGGTGCATCAGATTGGAGTGAGTCTgatttattaatgaaaaatgttGAGAGTAGATTGGGAGGAGGAGAAATGGAAATGCTCAAGGTCTTAGTTGTTAGTGTGTGTTGCCCTGTGAGCGAGTGTCCACTGGTTATTGTATCACAAGTGTGGGCCGTTGGCTAG 2205 0.4154 MEEKRGEASKTVNDAAANFTSLRMHSFDKRVVENKCSSGNGIRKTKSLNAQFLINIDELMISNKIDSNTNEIRYSLSLTAPTLLSDQLSDVLNLPTTPKCKEEEPASPCKLARLHMEPTMPIYLKFEDVKYKASTKGVKCTSEEEKFILHGITGSVRPGEILALMGPSGGGKTTLLNILSGRIKLDSGSITYNDKPYTKSLKQRIGYVTQDDVVFPHLTVKETLTYAALLRLSKNLSRTQKKERAMNVLSELCLDRCQDTIIGGKFIRGVSGGERKRVCIATEILLNPSLLFLDEPTSGLDSTTASRIVQILHNIAKEGKTVVTTIHQPSSRLFSMFDKLILLGKGSTLYFGEASDAMMYFSSIGCSPLISMNPAEFLIDLANGNMNDKSVPSELEDKFHYAITTKLDTKHNHKNNELSPLDVHEFLVEAYEVRLKEREKTRLLEPVIMIGENGNQGRPFIRDFGATWAEQFCILFRRGIRERRHEYFSSVRVTQVISTAIIVGLLWWHPGASSSSPKTIQDQAGLLFFLSVFWGFYPLFTAIFMFPQERAMLVKERSIGMYKLSAYFFAKNISDIPLELLMPTVFLVIMYFMVGLNSQFSAFFLTMLTVFLSVLAAQGLGQSISAAFLDVKKATTLASITVMTFMLTGGFFSEGVPKFMSWVRYVSFNYHTYRLLLKIQYGASDWSESDLLMKNVESRLGGGEMEMLKVLVVSVCCPVSECPLVIVSQVWAVG 734
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1214 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 358 IPR027417 -
Sto5g1214 734 Pfam ABC transporter 149 298 IPR003439 GO:0005524
Sto5g1214 734 Pfam ABC-2 type transporter 327 390 IPR043926 GO:0140359
Sto5g1214 734 ProSitePatterns ABC transporters family signature. 270 284 IPR017871 GO:0005524
Sto5g1214 734 Pfam ABC-2 type transporter 470 681 IPR013525 GO:0016020|GO:0140359
Sto5g1214 734 Gene3D - 124 363 IPR027417 -
Sto5g1214 734 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 53 712 - -
Sto5g1214 734 SMART AAA_5 158 347 IPR003593 -
Sto5g1214 734 CDD ABCG_EPDR 121 352 - -
Sto5g1214 734 PANTHER ABC TRANSPORTER G FAMILY MEMBER 22-LIKE ISOFORM X1 53 712 - -
Sto5g1214 734 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 124 370 IPR003439 GO:0005524
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sto5g1214 Sto-Chr5 8189559 8193896 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1214 148 406 Calmodulin-binding Proteins AT2G36910 26.894 4.80e-14 74.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1214 K05681 - jre:109005390 863.988
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1214 5 8189559 8193896 Sto5g1214 5 8189559 8193896 ECH