Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1211 ATGGAGTTATGGGAATTTCAATATCCTACTATCCATGATATAGAGAAGCATAGAGACAATGCAATAACTCTCTTTATCTTGTTTCTTAATATCTCCTTGTTTCCATCCATCTCTGCCCTGAACCAGGAAGGTCTCTCTCTACTTTCATGGCTTTCTACCTTCAATTCCTCGGACGAGTCTGCTACATCCTTCTCTTCATGGAATCCAACCCACAAAGATCCTTGCACATGGGATTATATCAAATGTTCCAAAGATGGGTTTGTTTCAGAAATCACAATCAAGTCCATTAATCTTCGTAGCAGCTTCCCCACACAGGTCCTTTCTTTTCCTCACCTTACCACTCTTGTCATCTCCAATGGAAATCTTACTGGCGAGATTCCAAGTTCAGTGGGAAACTTGACCTCCTTGCTTACTTTGGACCTCAGCTTCAATGCTTTGTCAGGAAGCATTCCTGCAGAAATAGGTAAGTTACATAATCTGCAGTGGCTTTCATTGAATTCAAATTCATTACAAGGTGGAATTCCAGCAGAAATTGGGAATTTTTCAAAGCTTAGGCAGATGGAACTGTATGACAACCAGCTCTCTGGTAAGATTCCTGCAGAAATAGGCATGTTGAAGAATCTTGAAACGTTTAGAGCAGGTGGAAATCAGGGTATCCATGGTGAAATTCCAATGCAGATATCAAATTGCAAGGCTCTCACTTTGCTGGGTCTTGCAGATACTGGGGTCTCTGGGGAGATTCCATCAAGCATAGGAGAACTCACAAATCTCAAGACACTTTCAGTCTACACAGCGAACCTCACTGGTCACATCCCACCAGAGATTCATAACTGCTCAGCTTTGGAGAATCTGTTTCTATATGAAAATCAGCTTTCTGGTAATATTCCTTATGAATTGGGCTTCATGAAAAGCCTCAAAAGGGTATTGCTATGGCAGAACAATTTGACAGGCACCATTCCAGAATCTCTCGGGAATTGTACAAGTCTGATGGTTATAGATTTCTCTATGAATTCTTTAGAAGGTGAGCTCCCTGTGAATTTCAGAAATTTACTCTCAATGGAAGAGTTTCTTGTGTCTGATAATAGCATTTCTGGAGAAATACCTTCCTATATTGGCAACTTTTCCAGACTAAAGCAACTCGAATTAGATAACAACCTACTATCTGGCAAGATTCCACCTGTTATGGGACAACTGAAAGAACTCACCTTGTTCTATGCATGGCAGAACCAGCTCCAAGGAAGCATACCCACAGAACTATCCAACTGTGAGAAACTTGAAGCTGTTGATCTTTCACACAACTTCCTCACAGGGTCAATTCCAAGTTCTCTATTTCATCTAGAGAACTTAACTCAATTACTGTTGATATCAAATCAACTTTCGGGTCAAATTCCACCAGATATTGGCAGCTGCACCAGCTTGATCAGGTTACGGATCGGATCCAACAATTTAACTGGTCAAATTCCACCAGAAATAGGTCTCTTAAGCAGTTTGAGCTTTCTTGAATTGTCAGATAATTTACTGACTGGAGAAATTCCTGACCAAATTGGTAACTGCAATCAGCTAGAAATGCTTGACTTGCACAGGAATCAACTGCAAGGAACAATTCCTTCCTCATTTGAATTCCTAACTGTTCTTAATGTTTTAGATCTTTCTGCAAACAGATTAACTGGCAGTATTCCTCATAATTTGGGAAAGCTTACATCTCTGAATAAGCTGATAATCAGTGGAAACAGCATTACAGATTTGATCCCTCAGTCATTGGGCCTTTGTAAGAATTTGCAGTTGCTAGATATTAGCAACAATAGAATCACTGGGTCCATTCCAGATGAGATTGGTCAATTGCAAGGACTAGACATTCTCTTGAACCTGAGTTGGAATTCTCTAACAGGCCCTATTCCAGATAGTTTCATAAATCTCTCAAAACTTTCCAACTTGGACCTCTCTCACAACAAGCTCACAGGCAGCCTCAGAGTATTGGGTAGTCTTGACAATTTAGTGTCTCTCAATGTCTCTTACAACAGTTTTTCTGGTTCTCTTCCTGATAACAAGTTCTTTCATGATCTTCCTGCTGCTGCATTTGCTGGTAACCCTGACCTCTGCATTGACAAGTGTGACATGAATGGAAATAGCCAAGGCACCAAGTCAATAAGAAATATTATTATCTACACTTTCCTTGGTGTTATTTTAACAGCTATGTTTGTGACTTTTGGTGTGATTTTAGCTCTCAGAATTCAAGGGACTACATTTGGGAGGAAATTTGATGAGGAAAGTGAATTGGAATGGGCTTTCACTCCATTTCAAAAACTCAACTTCTCCATCAATGACATTATCACAAAGTTATCAGATTCAAACATTATTGGAAAGGGTTGCTCGGGGATTGTTTATCGTGTGGAGACTCCAATGAAGCAGACTATAGCAGTGAAGAAACTGTGGCCAATAAAGAATGATGAGCAACCAGAGAGAGATCTGTTTTCTGCAGAAGTTCAGACCCTTGGATCGATAAGACATAAAAATATAGTCAGGCTTCTTGGATGCTGTAATAATGGAAGAACTAGATTGCTCTTGTTTGATTATATCTGTAATGGAAGTTTGCATGGATTGCTCCATGAAAAGAGGTTGTTCTTAGATTGGGATGCAAGGTATAAGATCATACTAGGAACAGCTCAAGGTTTAGAATATCTTCATCATGATTGTATCCCCCCAATTGTCCATCGTGACATTAAGGCTAACAACATCTTGGTAGGACCACAATTTGAAGCTTTTCTTGCAGATTTTGGTCTTGCAAAACTTGTGAATTCATCCGAGTGTTCGAAAGCCTCTGCTATTGTTGCAGGTTCTTATGGCTACATAGCTCCTGAATATGGATACAGTTTACGGATCACAGAGAAGAGTGATGTGTACAGTTATGGTGTGGTGCTACTGGAGTTGTTAACGGGGATGGAGCCAACTGATAATAGGATTCCTGAGGGTGCTCACATTGTGACTTGGGTTAACAGGGAAATCAGAGAGAAGAGAACAGAATTCAGTTCAATTCTGGATCAGCAACTAGTATTGCAATGTGGTACAAGAACCCAAGAGATGCTTCAAGTGCTAGGGGTGGCTCTCCTCTGTGTCAATCCATCCCCAGAAGAACGACCAACCATGAAAGATGTTACAGCAATGCTCAAGGAGATCAGACATGAATGTGACAATTACGAGAAGCCAAGTTTTCTCCACAAAGGGGCAGTCACCAATCAGAAAGTAGCAGTTCACTGTTCAAGTTTCTCTAGATCATGTGAACCACTAATAGagtcctcttcatcttcttcttcttcctaa 3318 0.4008 MELWEFQYPTIHDIEKHRDNAITLFILFLNISLFPSISALNQEGLSLLSWLSTFNSSDESATSFSSWNPTHKDPCTWDYIKCSKDGFVSEITIKSINLRSSFPTQVLSFPHLTTLVISNGNLTGEIPSSVGNLTSLLTLDLSFNALSGSIPAEIGKLHNLQWLSLNSNSLQGGIPAEIGNFSKLRQMELYDNQLSGKIPAEIGMLKNLETFRAGGNQGIHGEIPMQISNCKALTLLGLADTGVSGEIPSSIGELTNLKTLSVYTANLTGHIPPEIHNCSALENLFLYENQLSGNIPYELGFMKSLKRVLLWQNNLTGTIPESLGNCTSLMVIDFSMNSLEGELPVNFRNLLSMEEFLVSDNSISGEIPSYIGNFSRLKQLELDNNLLSGKIPPVMGQLKELTLFYAWQNQLQGSIPTELSNCEKLEAVDLSHNFLTGSIPSSLFHLENLTQLLLISNQLSGQIPPDIGSCTSLIRLRIGSNNLTGQIPPEIGLLSSLSFLELSDNLLTGEIPDQIGNCNQLEMLDLHRNQLQGTIPSSFEFLTVLNVLDLSANRLTGSIPHNLGKLTSLNKLIISGNSITDLIPQSLGLCKNLQLLDISNNRITGSIPDEIGQLQGLDILLNLSWNSLTGPIPDSFINLSKLSNLDLSHNKLTGSLRVLGSLDNLVSLNVSYNSFSGSLPDNKFFHDLPAAAFAGNPDLCIDKCDMNGNSQGTKSIRNIIIYTFLGVILTAMFVTFGVILALRIQGTTFGRKFDEESELEWAFTPFQKLNFSINDIITKLSDSNIIGKGCSGIVYRVETPMKQTIAVKKLWPIKNDEQPERDLFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYICNGSLHGLLHEKRLFLDWDARYKIILGTAQGLEYLHHDCIPPIVHRDIKANNILVGPQFEAFLADFGLAKLVNSSECSKASAIVAGSYGYIAPEYGYSLRITEKSDVYSYGVVLLELLTGMEPTDNRIPEGAHIVTWVNREIREKRTEFSSILDQQLVLQCGTRTQEMLQVLGVALLCVNPSPEERPTMKDVTAMLKEIRHECDNYEKPSFLHKGAVTNQKVAVHCSSFSRSCEPLIESSSSSSSS 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1211 1105 PANTHER LRR RECEPTOR-LIKE KINASE 19 1076 - -
Sto5g1211 1105 Gene3D Phosphorylase Kinase; domain 1 747 858 - -
Sto5g1211 1105 Gene3D Ribonuclease Inhibitor 297 450 IPR032675 -
Sto5g1211 1105 Pfam Protein kinase domain 783 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1211 1105 SMART serkin_6 780 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1211 1105 Gene3D Ribonuclease Inhibitor 196 296 IPR032675 -
Sto5g1211 1105 Gene3D Ribonuclease Inhibitor 451 708 IPR032675 -
Sto5g1211 1105 ProSiteProfiles Leucine-rich repeat profile. 641 663 IPR001611 GO:0005515
Sto5g1211 1105 Pfam Leucine Rich Repeat 424 446 IPR001611 GO:0005515
Sto5g1211 1105 Pfam Leucine Rich Repeat 592 612 IPR001611 GO:0005515
Sto5g1211 1105 Pfam Leucine Rich Repeat 621 639 IPR001611 GO:0005515
Sto5g1211 1105 SUPERFAMILY L domain-like 66 411 - -
Sto5g1211 1105 Gene3D Transferase(Phosphotransferase) domain 1 859 1077 - -
Sto5g1211 1105 ProSitePatterns Serine/Threonine protein kinases active-site signature. 902 914 IPR008271 GO:0004672|GO:0006468
Sto5g1211 1105 SUPERFAMILY RNI-like 310 674 - -
Sto5g1211 1105 ProSiteProfiles Leucine-rich repeat profile. 592 614 IPR001611 GO:0005515
Sto5g1211 1105 Pfam Leucine rich repeat N-terminal domain 41 83 IPR013210 -
Sto5g1211 1105 SMART LRR_typ_2 590 614 IPR003591 -
Sto5g1211 1105 SMART LRR_typ_2 302 326 IPR003591 -
Sto5g1211 1105 SMART LRR_typ_2 133 156 IPR003591 -
Sto5g1211 1105 SMART LRR_typ_2 542 565 IPR003591 -
Sto5g1211 1105 SMART LRR_typ_2 494 518 IPR003591 -
Sto5g1211 1105 SMART LRR_typ_2 566 589 IPR003591 -
Sto5g1211 1105 SMART LRR_typ_2 446 470 IPR003591 -
Sto5g1211 1105 SMART LRR_typ_2 662 695 IPR003591 -
Sto5g1211 1105 SMART LRR_typ_2 374 398 IPR003591 -
Sto5g1211 1105 SMART LRR_typ_2 157 181 IPR003591 -
Sto5g1211 1105 SMART LRR_typ_2 639 661 IPR003591 -
Sto5g1211 1105 SUPERFAMILY Protein kinase-like (PK-like) 776 1077 IPR011009 -
Sto5g1211 1105 ProSitePatterns Protein kinases ATP-binding region signature. 786 814 IPR017441 GO:0005524
Sto5g1211 1105 Pfam Leucine rich repeat 520 579 IPR001611 GO:0005515
Sto5g1211 1105 Pfam Leucine rich repeat 110 170 IPR001611 GO:0005515
Sto5g1211 1105 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 19 1076 - -
Sto5g1211 1105 PRINTS Leucine-rich repeat signature 545 558 - -
Sto5g1211 1105 PRINTS Leucine-rich repeat signature 639 652 - -
Sto5g1211 1105 ProSiteProfiles Protein kinase domain profile. 780 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1211 1105 Gene3D Ribonuclease Inhibitor 42 195 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1211 Sto-Chr5 8166143 8169659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1211 39 1093 Receptor kinase-like Gene Family AT5G56040 46.211 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto5g1211 Pkinase 9.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1211 - - gmx:100807225 1758.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1211 5 8166143 8169659 Sto5g1211 5 8166143 8169659 ECH