Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto5g1211 | ATGGAGTTATGGGAATTTCAATATCCTACTATCCATGATATAGAGAAGCATAGAGACAATGCAATAACTCTCTTTATCTTGTTTCTTAATATCTCCTTGTTTCCATCCATCTCTGCCCTGAACCAGGAAGGTCTCTCTCTACTTTCATGGCTTTCTACCTTCAATTCCTCGGACGAGTCTGCTACATCCTTCTCTTCATGGAATCCAACCCACAAAGATCCTTGCACATGGGATTATATCAAATGTTCCAAAGATGGGTTTGTTTCAGAAATCACAATCAAGTCCATTAATCTTCGTAGCAGCTTCCCCACACAGGTCCTTTCTTTTCCTCACCTTACCACTCTTGTCATCTCCAATGGAAATCTTACTGGCGAGATTCCAAGTTCAGTGGGAAACTTGACCTCCTTGCTTACTTTGGACCTCAGCTTCAATGCTTTGTCAGGAAGCATTCCTGCAGAAATAGGTAAGTTACATAATCTGCAGTGGCTTTCATTGAATTCAAATTCATTACAAGGTGGAATTCCAGCAGAAATTGGGAATTTTTCAAAGCTTAGGCAGATGGAACTGTATGACAACCAGCTCTCTGGTAAGATTCCTGCAGAAATAGGCATGTTGAAGAATCTTGAAACGTTTAGAGCAGGTGGAAATCAGGGTATCCATGGTGAAATTCCAATGCAGATATCAAATTGCAAGGCTCTCACTTTGCTGGGTCTTGCAGATACTGGGGTCTCTGGGGAGATTCCATCAAGCATAGGAGAACTCACAAATCTCAAGACACTTTCAGTCTACACAGCGAACCTCACTGGTCACATCCCACCAGAGATTCATAACTGCTCAGCTTTGGAGAATCTGTTTCTATATGAAAATCAGCTTTCTGGTAATATTCCTTATGAATTGGGCTTCATGAAAAGCCTCAAAAGGGTATTGCTATGGCAGAACAATTTGACAGGCACCATTCCAGAATCTCTCGGGAATTGTACAAGTCTGATGGTTATAGATTTCTCTATGAATTCTTTAGAAGGTGAGCTCCCTGTGAATTTCAGAAATTTACTCTCAATGGAAGAGTTTCTTGTGTCTGATAATAGCATTTCTGGAGAAATACCTTCCTATATTGGCAACTTTTCCAGACTAAAGCAACTCGAATTAGATAACAACCTACTATCTGGCAAGATTCCACCTGTTATGGGACAACTGAAAGAACTCACCTTGTTCTATGCATGGCAGAACCAGCTCCAAGGAAGCATACCCACAGAACTATCCAACTGTGAGAAACTTGAAGCTGTTGATCTTTCACACAACTTCCTCACAGGGTCAATTCCAAGTTCTCTATTTCATCTAGAGAACTTAACTCAATTACTGTTGATATCAAATCAACTTTCGGGTCAAATTCCACCAGATATTGGCAGCTGCACCAGCTTGATCAGGTTACGGATCGGATCCAACAATTTAACTGGTCAAATTCCACCAGAAATAGGTCTCTTAAGCAGTTTGAGCTTTCTTGAATTGTCAGATAATTTACTGACTGGAGAAATTCCTGACCAAATTGGTAACTGCAATCAGCTAGAAATGCTTGACTTGCACAGGAATCAACTGCAAGGAACAATTCCTTCCTCATTTGAATTCCTAACTGTTCTTAATGTTTTAGATCTTTCTGCAAACAGATTAACTGGCAGTATTCCTCATAATTTGGGAAAGCTTACATCTCTGAATAAGCTGATAATCAGTGGAAACAGCATTACAGATTTGATCCCTCAGTCATTGGGCCTTTGTAAGAATTTGCAGTTGCTAGATATTAGCAACAATAGAATCACTGGGTCCATTCCAGATGAGATTGGTCAATTGCAAGGACTAGACATTCTCTTGAACCTGAGTTGGAATTCTCTAACAGGCCCTATTCCAGATAGTTTCATAAATCTCTCAAAACTTTCCAACTTGGACCTCTCTCACAACAAGCTCACAGGCAGCCTCAGAGTATTGGGTAGTCTTGACAATTTAGTGTCTCTCAATGTCTCTTACAACAGTTTTTCTGGTTCTCTTCCTGATAACAAGTTCTTTCATGATCTTCCTGCTGCTGCATTTGCTGGTAACCCTGACCTCTGCATTGACAAGTGTGACATGAATGGAAATAGCCAAGGCACCAAGTCAATAAGAAATATTATTATCTACACTTTCCTTGGTGTTATTTTAACAGCTATGTTTGTGACTTTTGGTGTGATTTTAGCTCTCAGAATTCAAGGGACTACATTTGGGAGGAAATTTGATGAGGAAAGTGAATTGGAATGGGCTTTCACTCCATTTCAAAAACTCAACTTCTCCATCAATGACATTATCACAAAGTTATCAGATTCAAACATTATTGGAAAGGGTTGCTCGGGGATTGTTTATCGTGTGGAGACTCCAATGAAGCAGACTATAGCAGTGAAGAAACTGTGGCCAATAAAGAATGATGAGCAACCAGAGAGAGATCTGTTTTCTGCAGAAGTTCAGACCCTTGGATCGATAAGACATAAAAATATAGTCAGGCTTCTTGGATGCTGTAATAATGGAAGAACTAGATTGCTCTTGTTTGATTATATCTGTAATGGAAGTTTGCATGGATTGCTCCATGAAAAGAGGTTGTTCTTAGATTGGGATGCAAGGTATAAGATCATACTAGGAACAGCTCAAGGTTTAGAATATCTTCATCATGATTGTATCCCCCCAATTGTCCATCGTGACATTAAGGCTAACAACATCTTGGTAGGACCACAATTTGAAGCTTTTCTTGCAGATTTTGGTCTTGCAAAACTTGTGAATTCATCCGAGTGTTCGAAAGCCTCTGCTATTGTTGCAGGTTCTTATGGCTACATAGCTCCTGAATATGGATACAGTTTACGGATCACAGAGAAGAGTGATGTGTACAGTTATGGTGTGGTGCTACTGGAGTTGTTAACGGGGATGGAGCCAACTGATAATAGGATTCCTGAGGGTGCTCACATTGTGACTTGGGTTAACAGGGAAATCAGAGAGAAGAGAACAGAATTCAGTTCAATTCTGGATCAGCAACTAGTATTGCAATGTGGTACAAGAACCCAAGAGATGCTTCAAGTGCTAGGGGTGGCTCTCCTCTGTGTCAATCCATCCCCAGAAGAACGACCAACCATGAAAGATGTTACAGCAATGCTCAAGGAGATCAGACATGAATGTGACAATTACGAGAAGCCAAGTTTTCTCCACAAAGGGGCAGTCACCAATCAGAAAGTAGCAGTTCACTGTTCAAGTTTCTCTAGATCATGTGAACCACTAATAGagtcctcttcatcttcttcttcttcctaa | 3318 | 0.4008 | MELWEFQYPTIHDIEKHRDNAITLFILFLNISLFPSISALNQEGLSLLSWLSTFNSSDESATSFSSWNPTHKDPCTWDYIKCSKDGFVSEITIKSINLRSSFPTQVLSFPHLTTLVISNGNLTGEIPSSVGNLTSLLTLDLSFNALSGSIPAEIGKLHNLQWLSLNSNSLQGGIPAEIGNFSKLRQMELYDNQLSGKIPAEIGMLKNLETFRAGGNQGIHGEIPMQISNCKALTLLGLADTGVSGEIPSSIGELTNLKTLSVYTANLTGHIPPEIHNCSALENLFLYENQLSGNIPYELGFMKSLKRVLLWQNNLTGTIPESLGNCTSLMVIDFSMNSLEGELPVNFRNLLSMEEFLVSDNSISGEIPSYIGNFSRLKQLELDNNLLSGKIPPVMGQLKELTLFYAWQNQLQGSIPTELSNCEKLEAVDLSHNFLTGSIPSSLFHLENLTQLLLISNQLSGQIPPDIGSCTSLIRLRIGSNNLTGQIPPEIGLLSSLSFLELSDNLLTGEIPDQIGNCNQLEMLDLHRNQLQGTIPSSFEFLTVLNVLDLSANRLTGSIPHNLGKLTSLNKLIISGNSITDLIPQSLGLCKNLQLLDISNNRITGSIPDEIGQLQGLDILLNLSWNSLTGPIPDSFINLSKLSNLDLSHNKLTGSLRVLGSLDNLVSLNVSYNSFSGSLPDNKFFHDLPAAAFAGNPDLCIDKCDMNGNSQGTKSIRNIIIYTFLGVILTAMFVTFGVILALRIQGTTFGRKFDEESELEWAFTPFQKLNFSINDIITKLSDSNIIGKGCSGIVYRVETPMKQTIAVKKLWPIKNDEQPERDLFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYICNGSLHGLLHEKRLFLDWDARYKIILGTAQGLEYLHHDCIPPIVHRDIKANNILVGPQFEAFLADFGLAKLVNSSECSKASAIVAGSYGYIAPEYGYSLRITEKSDVYSYGVVLLELLTGMEPTDNRIPEGAHIVTWVNREIREKRTEFSSILDQQLVLQCGTRTQEMLQVLGVALLCVNPSPEERPTMKDVTAMLKEIRHECDNYEKPSFLHKGAVTNQKVAVHCSSFSRSCEPLIESSSSSSSS | 1105 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto5g1211 | 1105 | PANTHER | LRR RECEPTOR-LIKE KINASE | 19 | 1076 | - | - | |
Sto5g1211 | 1105 | Gene3D | Phosphorylase Kinase; domain 1 | 747 | 858 | - | - | |
Sto5g1211 | 1105 | Gene3D | Ribonuclease Inhibitor | 297 | 450 | IPR032675 | - | |
Sto5g1211 | 1105 | Pfam | Protein kinase domain | 783 | 1052 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sto5g1211 | 1105 | SMART | serkin_6 | 780 | 1055 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sto5g1211 | 1105 | Gene3D | Ribonuclease Inhibitor | 196 | 296 | IPR032675 | - | |
Sto5g1211 | 1105 | Gene3D | Ribonuclease Inhibitor | 451 | 708 | IPR032675 | - | |
Sto5g1211 | 1105 | ProSiteProfiles | Leucine-rich repeat profile. | 641 | 663 | IPR001611 | GO:0005515 | |
Sto5g1211 | 1105 | Pfam | Leucine Rich Repeat | 424 | 446 | IPR001611 | GO:0005515 | |
Sto5g1211 | 1105 | Pfam | Leucine Rich Repeat | 592 | 612 | IPR001611 | GO:0005515 | |
Sto5g1211 | 1105 | Pfam | Leucine Rich Repeat | 621 | 639 | IPR001611 | GO:0005515 | |
Sto5g1211 | 1105 | SUPERFAMILY | L domain-like | 66 | 411 | - | - | |
Sto5g1211 | 1105 | Gene3D | Transferase(Phosphotransferase) domain 1 | 859 | 1077 | - | - | |
Sto5g1211 | 1105 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 902 | 914 | IPR008271 | GO:0004672|GO:0006468 | |
Sto5g1211 | 1105 | SUPERFAMILY | RNI-like | 310 | 674 | - | - | |
Sto5g1211 | 1105 | ProSiteProfiles | Leucine-rich repeat profile. | 592 | 614 | IPR001611 | GO:0005515 | |
Sto5g1211 | 1105 | Pfam | Leucine rich repeat N-terminal domain | 41 | 83 | IPR013210 | - | |
Sto5g1211 | 1105 | SMART | LRR_typ_2 | 590 | 614 | IPR003591 | - | |
Sto5g1211 | 1105 | SMART | LRR_typ_2 | 302 | 326 | IPR003591 | - | |
Sto5g1211 | 1105 | SMART | LRR_typ_2 | 133 | 156 | IPR003591 | - | |
Sto5g1211 | 1105 | SMART | LRR_typ_2 | 542 | 565 | IPR003591 | - | |
Sto5g1211 | 1105 | SMART | LRR_typ_2 | 494 | 518 | IPR003591 | - | |
Sto5g1211 | 1105 | SMART | LRR_typ_2 | 566 | 589 | IPR003591 | - | |
Sto5g1211 | 1105 | SMART | LRR_typ_2 | 446 | 470 | IPR003591 | - | |
Sto5g1211 | 1105 | SMART | LRR_typ_2 | 662 | 695 | IPR003591 | - | |
Sto5g1211 | 1105 | SMART | LRR_typ_2 | 374 | 398 | IPR003591 | - | |
Sto5g1211 | 1105 | SMART | LRR_typ_2 | 157 | 181 | IPR003591 | - | |
Sto5g1211 | 1105 | SMART | LRR_typ_2 | 639 | 661 | IPR003591 | - | |
Sto5g1211 | 1105 | SUPERFAMILY | Protein kinase-like (PK-like) | 776 | 1077 | IPR011009 | - | |
Sto5g1211 | 1105 | ProSitePatterns | Protein kinases ATP-binding region signature. | 786 | 814 | IPR017441 | GO:0005524 | |
Sto5g1211 | 1105 | Pfam | Leucine rich repeat | 520 | 579 | IPR001611 | GO:0005515 | |
Sto5g1211 | 1105 | Pfam | Leucine rich repeat | 110 | 170 | IPR001611 | GO:0005515 | |
Sto5g1211 | 1105 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 19 | 1076 | - | - | |
Sto5g1211 | 1105 | PRINTS | Leucine-rich repeat signature | 545 | 558 | - | - | |
Sto5g1211 | 1105 | PRINTS | Leucine-rich repeat signature | 639 | 652 | - | - | |
Sto5g1211 | 1105 | ProSiteProfiles | Protein kinase domain profile. | 780 | 1070 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sto5g1211 | 1105 | Gene3D | Ribonuclease Inhibitor | 42 | 195 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto5g1211 | Sto-Chr5 | 8166143 | 8169659 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto5g1211 | 39 | 1093 | Receptor kinase-like Gene Family | AT5G56040 | 46.211 | 0.0 | 932 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Sto5g1211 | Pkinase | 9.2e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto5g1211 | - | - | gmx:100807225 | 1758.42 |