Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1190 ATGGCTCTGTCAATAGGAAGAAGCTTCCCTTTACAGCCCTGCTCTTTATACAAAAGTGAGAGCATATATAATAAATCTTCATTAGGCGGAAGATGTTCGTGGCTCAGGCATGCTGGTGCTGAAATTACAAAGCCATGTACGCGAACTTGCATTGCAGCAGCAGCTCAACAGCGTCCTACGTGGCTCCCAGGGCTCGACCCTCCACCTTATCTTGATGGAACTCTGGCTGGAGATTTTGGGTTCGATCCTCTCGGACTTGGAGAGGACCCGAGAAGCTTGAAGTGGTATGTTCAAGCAGAGCTTGTTCATGCTCGATTTGCAATGATTGGGGTCTCAGGAATTCTACTCACAGATACACTTCGTGTTGCAGGAATTAAAACGATACCGCTTTGGTATGAAGCTGGTGCAGGAAAATATTTTGCAAATACAGAGACTCTGTtcattattcaattatttttgaTGGGCTTCGTTGAAACAAAAAGATACATGGATTTCGTTAGTCCTGGATCTCAAGCTAAAGAGGGATCGTTCTTTGGATTGGAAGCTGCATTTGAAGGTTTAGAGCCAggGTACCCTGGAGGTCCTTTGCTAAATCCTCTGGGACTAGCAAAAGACATAAAAGACGCACATGATTGGAAGCTTAAAGAGATCAAGAACGGGCGACTTGCAATGATGGCAATGCTTGGCATATTTGTGCAAGCTTCTGTGACTCATGTTGGACCAATTGATAACCTGGTGGAGCATCTTTCCAATCCATGGCACAAAACTATTATACAGACCCTAGCCAGCTCTAGTTCTTAG 801 0.4395 MALSIGRSFPLQPCSLYKSESIYNKSSLGGRCSWLRHAGAEITKPCTRTCIAAAAQQRPTWLPGLDPPPYLDGTLAGDFGFDPLGLGEDPRSLKWYVQAELVHARFAMIGVSGILLTDTLRVAGIKTIPLWYEAGAGKYFANTETLFIIQLFLMGFVETKRYMDFVSPGSQAKEGSFFGLEAAFEGLEPGYPGGPLLNPLGLAKDIKDAHDWKLKEIKNGRLAMMAMLGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLASSSS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1190 266 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 34 263 IPR001344 GO:0009765|GO:0016020
Sto5g1190 266 SUPERFAMILY Chlorophyll a-b binding protein 52 263 - -
Sto5g1190 266 Pfam Chlorophyll A-B binding protein 67 234 IPR022796 -
Sto5g1190 266 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 5, CHLOROPLASTIC 34 263 - -
Sto5g1190 266 Gene3D Chlorophyll a/b binding protein domain 68 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1190 Sto-Chr5 8028806 8030051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1190 42 258 Chloroplast and Mitochondria Gene Families AT3G61470 45.872 5.82e-63 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1190 K08911 - gmx:100804934 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1190 5 8028806 8030051 Sto5g1190 5 8028806 8030051 ECH