Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1173 ATGACGACGAACTACGCGTTTCTGAATGATCAGCTATCAAAGCATACCTCAATTTTCGGGTTACGCCTCTGGGTGGTGCTGGGCATATGCGTGGGAGCTGCGATTGTGCTCGTCCTCTTTCTCATATCACTCTGGTTCACTGCCAAGCGCAACAATGCGTCCAAGCTCAAGTCCTCCATCGCTCACAACCCCAACATCCCAAATGTCTCCAAGGAGATCCAGGAAATCCGTATTGATCATTCTCGCGACCCGACCAAGCCCACCCTTCTTCCCAACCCGGACCCATTGCCCGAATCTGAGTCGGACGCACTGGATAGAGCCCAAGCCATTCTTCTTCAGCAGGAGGACGAAAGCCCAGCCACGGGACGCCACAGGATTCACATTGAAATCGGAAAGGATCATCGGATTTCGTACCCTGACAGGGGCGGCGGCGGGTCATCGCAAGGCAGCGGCGAGGTTCGCTCCGGTGAGCAATCCTCTATTGCGGTGCCGGAAGTTTCCCATTTGGGTTGGGGGCATTGGTACACTCTTCGAGAGCTTGAAGTCGCTACTAATTTCTTTGCGGATGAGAATGTCATTGGCGAAGGTGGCTACGGAATTGTGTACCGTGGTGTGTTGCAAGATAATACCAATGTTGCTGTTAAAAATTTGCTCAATAACAGGGGACAAGCTGAGAGGGAATTCAAGGTAGAAGTGGAAGCAATTGGACGTGTTAGGCATAAAAATTTGGTGAGGTTACTTGGATATTGTGTTGAAGGAGCCCATAgGATGCTTGTTTACGAGTATGTTGACAATGGAAACCTAGAACAGTGGCTACATGGAGATGCCGGGCCTTCTAGCCCTCTTACTTGGGAAATTCGAATGAATATAATCCTTGGAACTGCAAAAGGGTTGACATACCTTCATGAGGGGCTTGAGCCCAAGGTTGTTCATCGCGATATCAAGTCGAGCAACATATTGCTTGATAAGCAATGGAATGCAAAAGTTTCTGATTTTGGCCTTGCAAAACTCTTGGGATCTGAAAGGACTTATGTGACAACCCGTGTGATGGGAACATTTGGATACGTTGCTCCAGAATATGCAAGCACTGGTATGTTAAACGAAAGAAGTGATGTATATAGCTTTGGGGTTCTAATTATGGAGATAATTTCTGGTAGAAACCCAGTAGATTATAGCCGCCCTCCTGGAGAGGTGAATCTGGTTGAGTGGCTGAAGACAATGGTTACAAACCGAAATGCAGAAGGAGTTCTGGATCCTAGGCTACCTGAGAAGCCTTCTTCTAGGGCACTGAAGCGTGCCTTATTAGTAGCTTTACGGTGTGTAGATCCAAATGCCCAGAAAAGGCCAAAGATGGGGCATGTTATACATATGCTTGAAGCTGATGAGTTCCCTTTTCGAGATGACCGTAGAGCTGGAAGGGAACATGGACGACCCCATCGGGATAGGTTGATGGAGAAGCGAGTTGGCGAATCAGGTGACAGTAGTGGGTATGAAAGTAGTGTCCATGCTAATAATTCTTTGTGGAGAAAGCAAGAACCTGAAGAACAGTAG 1551 0.4784 MTTNYAFLNDQLSKHTSIFGLRLWVVLGICVGAAIVLVLFLISLWFTAKRNNASKLKSSIAHNPNIPNVSKEIQEIRIDHSRDPTKPTLLPNPDPLPESESDALDRAQAILLQQEDESPATGRHRIHIEIGKDHRISYPDRGGGGSSQGSGEVRSGEQSSIAVPEVSHLGWGHWYTLRELEVATNFFADENVIGEGGYGIVYRGVLQDNTNVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAHRMLVYEYVDNGNLEQWLHGDAGPSSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNAKVSDFGLAKLLGSERTYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGVLIMEIISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLPEKPSSRALKRALLVALRCVDPNAQKRPKMGHVIHMLEADEFPFRDDRRAGREHGRPHRDRLMEKRVGESGDSSGYESSVHANNSLWRKQEPEEQ 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1173 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Sto5g1173 516 MobiDBLite consensus disorder prediction 469 492 - -
Sto5g1173 516 ProSitePatterns Protein kinases ATP-binding region signature. 193 215 IPR017441 GO:0005524
Sto5g1173 516 MobiDBLite consensus disorder prediction 493 507 - -
Sto5g1173 516 PANTHER OS01G0323000 PROTEIN 5 507 - -
Sto5g1173 516 Gene3D Transferase(Phosphotransferase) domain 1 263 470 - -
Sto5g1173 516 ProSiteProfiles Protein kinase domain profile. 187 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1173 516 CDD STKc_IRAK 193 459 - -
Sto5g1173 516 SMART serkin_6 187 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1173 516 Gene3D Phosphorylase Kinase; domain 1 153 262 - -
Sto5g1173 516 MobiDBLite consensus disorder prediction 129 159 - -
Sto5g1173 516 Pfam Protein tyrosine and serine/threonine kinase 191 458 IPR001245 GO:0004672|GO:0006468
Sto5g1173 516 SUPERFAMILY Protein kinase-like (PK-like) 168 459 IPR011009 -
Sto5g1173 516 MobiDBLite consensus disorder prediction 80 101 - -
Sto5g1173 516 PANTHER RECEPTOR-LIKE KINASE PLANT 5 507 - -
Sto5g1173 516 MobiDBLite consensus disorder prediction 469 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1173 Sto-Chr5 7872836 7875409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1173 145 461 Trihelix Transcription Factor Family AT1G70460 47.205 5.36e-91 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Sto5g1173 PK_Tyr_Ser-Thr 6.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1173 - - zju:107419996 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1173 5 7872836 7875409 Sto2g0703 2 5991241 5994666 ECH
Sto5g1173 5 7872836 7875409 Sto10g0174 10 1429560 1432505 ECH
Sto5g1173 5 7872836 7875409 Sto5g1173 5 7872836 7875409 ECH