Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1149 ATGCATATCCTAAACTTCCTTCTCCTCCCTTTCGTACTGTGGATTATTCCTGCCACATGTACATCAGATTCCCTCCAAGAAGGCTTCTCTCTCTCAGTTGAGAAACCAACGACCGATGTTCTAATTTCATCCAACGGTGTCTTCTCCGCTGGGTTCTATAAAGTGGGTGACAACGCCTTCTGCTTTTCCGTTTGGTTCACAAAGTCCCATCAACCCACCCTCGTGTGGATGGCCAACCGAGACCAACCCGTTAACGGAAAATCCTCAAAACTGACACTTTTCAAGAATGGGAATCTCATTTTGAGCGACGCAGGACAAACGGGGACCACAATTTGGAGCACCGCCACGTTTTCCTCTTTGGCAGTTGAGTTAAAGCTGAAGGACAACGGCAACCTCGTGCTTCGAACTTTACAAGGCAATACCGAAACTGTGCTTTGGCAAAGCTTTGACTCCCCAACCGATACCCTTCTTCCCGGTCAACCGGTGACAGAGAAAGCAAGCCTTATTTCATTTAGAAGCACCACCAACTTCTCCTCTGGCTTCTATAAGCTTTACTTCGACAACGACAATGTTCTTCGCCTCGTTTACCGAAGTCCTAGCCTCTCCAGCGTGTACTGGTCACCGCCGTGGAGTTTGCCCGTTGATGAAGGCAGGTCCACCTACAACGTTTCTAAAATTGCGGTGTTGGATTCCTTTGGCTATTTTTCCTCCTCCGATGCTTTCAAATTCTATTCAACGGACTACGGTGTTCCACGATACAGACGACTGGTGTTGGATCCTGACGGTACCTTGCGTGTCTATAGCTTCAATGAGGACACCGAGACGTGGGAGGTTTCATGGCAACACGATCCCGAACCATGTGCAATTCATGGTGTATGCGGAGCTAATAGCATGTGCACTTACCATACTTACTTGGGCAGGAGTTGCTATTGCCTACGAGGATTCAAGTTTAAGGATCCCAACGATTGGTCTCAAGGTTGTGAACCTCAGTTCACTACCCCTTTCTCTTGCAATCGCTCCCAATATGATTTCCTCCGTCTTCCCGTTATGGAATTCTACGGCTACGACTTACGCGTGGACGCCGTTTTCAACGTCACACAATGCCAAGACATATGCTTGAGTCTGTGTGATGATTGCAAAGgttttcaattcaaattcaaCGGAGTTGGCACTTACAATTGTTACATCAAAACAATGTTAATGAACGGACGAGATTCCCCCAATTTCGACGGAGATGTGTACATCAAATTGCCCAAATCCACTCTCCTCTCCTCCAAGGATCCTCTCAAACACGCGCCCTTGAACTGCTCCCCTGCTTTGTTTCAAACATTGAACAGAATTTATCAAAACCCACAAAAACACACGTGGCTGAATTTCCTGCTGTGGTTCGCTTGCGGGATTGGAGGCCTTGAGATCACCGCCATTTTCCTCGTGTGGTTCTTCCTATTCAGAAGCAGTAGAGAAAGTGATAAAGGAGATCTCAGACAACAACTTGTTTCCGCCACTGGGTTCCAAAGGTTTGGCTATTCAGAGCTCAAAAAGGCCACAAAAGGATTCAGCGATGAGATAGGACGAGGAGGGGGAGGGATCGTGTACAAAGGGGTCTTACAAGATAACCGTGTGGCAGCAATCAAGCGCCTCACGAGCGAATCCAATCaaggagaagaagaatttcTGGCTGAGATAAGCACGATTGGAATGCTGAATCACATGAATTTGATAGACATGTGGGGATATTGCGTGGAGGGGAAGCAAAGGCTATTGGTGTATGAATACATGGAGCATGGATCATTAGCACAGAATCTCTACTCCAATACACTTGATTGGAACAAAAGGTTTAATATTGCGGTAGGAACAGCCAGAGGATTAGCTTATTTGCATGAGGAATGCTTGGAATGGGTTCTGCATTGCGATGTGAAGCCTCAGAACATACTTTTGGATTCTGAGTTTCAACCCAAGGTAGCAGATTTTGGGTTGTCGAAGCTGCTTAATAGGGACGAGCGTGCAAATTCTGGGTTTTCCAGAATAAGAGGGACTAGAGGTTACATGGCACCAGAATGGGTGTACAATCTCCGAATTACTTCTAAAGTGGACGTGTATAGTTATGGGATTGTGATGTTGGAAATGATAACTGGAAAGAGTCCTATGGGGATTCATAGTTTGGAAAACAAAGGGGAAACAGATCAGCGGAGGTTGGTGACGTGGGTAAAGGAGAAGATAAATGGGGGTCCTACAAGCATGTTTTGGATGGAAGAGATAGCAGATCCTAATTTGGAAGGTAAATACGATTCTGCCAAGTTTGAGGTTTTGGTGAAAGTGGCTTTGCGTTGTGTGGAAGATGACATGAAGGAAAGACCCTCCATGAGCCAAGTTGTGGAGATGCTTCAGTTACCTCAGTACAGAGCCTTCCGATAA 2415 0.4571 MHILNFLLLPFVLWIIPATCTSDSLQEGFSLSVEKPTTDVLISSNGVFSAGFYKVGDNAFCFSVWFTKSHQPTLVWMANRDQPVNGKSSKLTLFKNGNLILSDAGQTGTTIWSTATFSSLAVELKLKDNGNLVLRTLQGNTETVLWQSFDSPTDTLLPGQPVTEKASLISFRSTTNFSSGFYKLYFDNDNVLRLVYRSPSLSSVYWSPPWSLPVDEGRSTYNVSKIAVLDSFGYFSSSDAFKFYSTDYGVPRYRRLVLDPDGTLRVYSFNEDTETWEVSWQHDPEPCAIHGVCGANSMCTYHTYLGRSCYCLRGFKFKDPNDWSQGCEPQFTTPFSCNRSQYDFLRLPVMEFYGYDLRVDAVFNVTQCQDICLSLCDDCKGFQFKFNGVGTYNCYIKTMLMNGRDSPNFDGDVYIKLPKSTLLSSKDPLKHAPLNCSPALFQTLNRIYQNPQKHTWLNFLLWFACGIGGLEITAIFLVWFFLFRSSRESDKGDLRQQLVSATGFQRFGYSELKKATKGFSDEIGRGGGGIVYKGVLQDNRVAAIKRLTSESNQGEEEFLAEISTIGMLNHMNLIDMWGYCVEGKQRLLVYEYMEHGSLAQNLYSNTLDWNKRFNIAVGTARGLAYLHEECLEWVLHCDVKPQNILLDSEFQPKVADFGLSKLLNRDERANSGFSRIRGTRGYMAPEWVYNLRITSKVDVYSYGIVMLEMITGKSPMGIHSLENKGETDQRRLVTWVKEKINGGPTSMFWMEEIADPNLEGKYDSAKFEVLVKVALRCVEDDMKERPSMSQVVEMLQLPQYRAFR 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1149 804 CDD STKc_IRAK 523 796 - -
Sto5g1149 804 CDD B_lectin 41 152 IPR001480 -
Sto5g1149 804 ProSiteProfiles PAN/Apple domain profile. 337 418 IPR003609 -
Sto5g1149 804 PIRSF SRK 1 799 IPR024171 GO:0004674
Sto5g1149 804 PANTHER RECEPTOR PROTEIN KINASE ZMPK1-RELATED 6 796 - -
Sto5g1149 804 Gene3D Phosphorylase Kinase; domain 1 483 592 - -
Sto5g1149 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Sto5g1149 804 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Sto5g1149 804 Gene3D - 18 151 IPR036426 -
Sto5g1149 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 209 IPR036426 -
Sto5g1149 804 Gene3D Transferase(Phosphotransferase) domain 1 593 802 - -
Sto5g1149 804 SMART blect_4 30 152 IPR001480 -
Sto5g1149 804 SMART serkin_6 517 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1149 804 ProSiteProfiles Protein kinase domain profile. 517 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1149 804 Pfam S-locus glycoprotein domain 251 318 IPR000858 GO:0048544
Sto5g1149 804 Pfam D-mannose binding lectin 73 162 IPR001480 -
Sto5g1149 804 SUPERFAMILY Protein kinase-like (PK-like) 494 797 IPR011009 -
Sto5g1149 804 CDD PAN_AP_plant 333 418 - -
Sto5g1149 804 ProSiteProfiles Bulb-type lectin domain profile. 16 147 IPR001480 -
Sto5g1149 804 PANTHER OS07G0415500 PROTEIN 6 796 - -
Sto5g1149 804 Pfam Protein kinase domain 521 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1149 Sto-Chr5 7666750 7677065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1149 450 796 Receptor kinase-like Gene Family AT5G45780 37.430 2.82e-65 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sto5g1149 Pkinase 6.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1149 - - gmx:100816469 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1149 5 7666750 7677065 Sto5g1149 5 7666750 7677065 ECH