Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1147 ATGCCACTTACTTGGATGGACCAGCTTAAGCCAGATGCACTTGGCTTTAACACAATCCCTAAGAGTGTGGAGAAGATCTTCAGAAGCTCCGTTGCAACGAGTACAAACATCAGAAACAGCGATACCACGCCGCTTCCTAGCCACATTAGTAAGGAGACGGTCATGGCCACAAAGCCAAAGAAAGGAGCGGACTTTCTCCATCCCTTTCCACTTCCACAACAGCTTCCAAAAATTTTGGTCTCAATGCCAGATCCTTGGCTTCGCTCGTGGGAGGCCGGAAGGTCTTCCTACAATAGCAGCAGAGTGGCGGTGCTGGATTCTCTTGGTAATTTCACTTCATCCGatgattttcattttactaCATCAGATTATGGGACAGTGATGATTCAGAGAAGATTGAAGCTTGATGAGGATGGGAATATTCGAGTGTACAGCCGACAAAACACAGATGATAATGGTGATTGGTCTGTTTCATGGCAAGCCAAAGTGGTTGATACATGCAAAATTCATGGTATATGTGGAGCTAACAGTACTTGCAGTTATGATCATAAACATGGGAGAAAATGCTCCTGCCTTCCGGGATATAAGCCTAGGAATCCTACTGATTGGTCTTTTGGGTGTATTCCTAAGTTTCAGTTGTCTTGCAATGCAAGCGAATCCAGCTTCCTAAAGATGGATGGAGTGGAGTTCTACGGCTATGATTTTCATTTCACCCAAAATCAAACCTATACTGAGTGTGAGAATCTCTGCCTCATGTATTGTAATTGCAAAGGGTTTCAGTACTCCTTCGAGAAGGAAAAAGGCCAATTTAATTGCTTTCCCAAAACGCAACTCCTCAATGCCCAACGCTCTCCAGGTTTTCAAGGCACAACCTACTTGCGAATACCTAAGGTTCATTCGTTCAACACTACTACTTATGAACAATATTCCACTGATCAGAAGAACTGTACACGTGTCATTTCTGTAACTCTTGAGAGAGTGTATACCACAAGGCAAGTAAGCGGACTCGTAAGGTTCTTCTTGTGGTGTGTGTGTGCAATTGGAGGGCTTGAATTGGTATGCATCATTCTGGTTTCCTCTTTTTTAATTAGGACTCGCCGAAAGTCTAGTCCAAGTAATAACTATGAGGGATACCATTACCATATGGCTGCCAGTGCCACTAGATTCAGAAAATTCACATACTCTGAGTTAAAGCAAGCAAGCAGGGGTTTCAGTGAGGAGATTGGAAGGGGTGGAGGAGGGGTTGTGTACAAAGGAGTCTTATCAGATCAACGAGTGGCTGCAATAAAGAGGCTGATATTGAATGAAGGAGAAGTAGAATTTCTAGCTGAGGTGAGTATAATAGGAAGGCTGAACCACATGAACTTAATTGAAATGTGGGGGTATTGTGCGGAGGGGAAGCACAGGTTATTGGTGTATGAATACATGGAGAATGGTTGTTTGGCTCAGAATCTGATCTCCTCAGCCTCAAACACTGTACTTGATTGGAGTAAGAGGTATAACATCGCTCTGGCAACAGCAAGAGGTTTGGCATATCTGCATGAGGAATGTTTGGAGTGGATTTTGCACTGTGACATAAAGCCTCAAAACATACTTTTGGATTCCAATTATGAGCCTAAAGTAGCGGATTTTGGGTTGTCTAAGCTACTATGTAGAAACAATgtcaataataacaataattcgAGGTTTTCGAGGATAAGAGGAACCAGGGGGTACATGGCGCCAGAGTGGGTATTCAACCTTCCAATAACGTCAAAGGTGGATGTATATAGCTATGGGATTGTGGTGTTGGAGATGATAACGGGAAAGAGCTCATCAATGGGCATACTACAAAAGGTGGATGGAGAAGAAGGACATGACGGGAGGCTGGTAACGTGGGTGAGAgagaaaaggagaaaaagacAGGAAAGTGAAGAGTGGGTGATGGGGATCGTTGATCCTGCAATTGGAGAAAACTGTGACGTACGTAAGATGGAACGTTTAGCAGAAGTGGCGCTGAAGTGTGTGGAGGAAGAGAAAGATGCGAGACCCAGCATGAGGCAAGTTGTTGAGGAGCTTCAGAGGCATCACAGTATTGATTGTTAA 2085 0.4307 MPLTWMDQLKPDALGFNTIPKSVEKIFRSSVATSTNIRNSDTTPLPSHISKETVMATKPKKGADFLHPFPLPQQLPKILVSMPDPWLRSWEAGRSSYNSSRVAVLDSLGNFTSSDDFHFTTSDYGTVMIQRRLKLDEDGNIRVYSRQNTDDNGDWSVSWQAKVVDTCKIHGICGANSTCSYDHKHGRKCSCLPGYKPRNPTDWSFGCIPKFQLSCNASESSFLKMDGVEFYGYDFHFTQNQTYTECENLCLMYCNCKGFQYSFEKEKGQFNCFPKTQLLNAQRSPGFQGTTYLRIPKVHSFNTTTYEQYSTDQKNCTRVISVTLERVYTTRQVSGLVRFFLWCVCAIGGLELVCIILVSSFLIRTRRKSSPSNNYEGYHYHMAASATRFRKFTYSELKQASRGFSEEIGRGGGGVVYKGVLSDQRVAAIKRLILNEGEVEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGCLAQNLISSASNTVLDWSKRYNIALATARGLAYLHEECLEWILHCDIKPQNILLDSNYEPKVADFGLSKLLCRNNVNNNNNSRFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGKSSSMGILQKVDGEEGHDGRLVTWVREKRRKRQESEEWVMGIVDPAIGENCDVRKMERLAEVALKCVEEEKDARPSMRQVVEELQRHHSIDC 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1147 694 ProSiteProfiles EGF-like domain profile. 163 201 IPR000742 -
Sto5g1147 694 Pfam Protein kinase domain 405 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1147 694 ProSiteProfiles PAN/Apple domain profile. 215 296 IPR003609 -
Sto5g1147 694 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 82 690 - -
Sto5g1147 694 Gene3D Transferase(Phosphotransferase) domain 1 476 693 - -
Sto5g1147 694 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 82 690 - -
Sto5g1147 694 Gene3D Phosphorylase Kinase; domain 1 367 475 - -
Sto5g1147 694 Pfam PAN-like domain 215 277 IPR003609 -
Sto5g1147 694 Pfam S-locus glycoprotein domain 116 198 IPR000858 GO:0048544
Sto5g1147 694 SUPERFAMILY Protein kinase-like (PK-like) 389 684 IPR011009 -
Sto5g1147 694 ProSitePatterns Protein kinases ATP-binding region signature. 408 430 IPR017441 GO:0005524
Sto5g1147 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Sto5g1147 694 SMART serkin_6 402 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1147 694 ProSiteProfiles Protein kinase domain profile. 402 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1147 694 CDD PAN_AP_plant 211 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1147 Sto-Chr5 7655429 7658031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1147 359 686 Trihelix Transcription Factor Family AT5G38560 40.882 8.48e-68 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sto5g1147 Pkinase 3.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1147 - - gmx:100785351 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1147 5 7655429 7658031 Sto5g1147 5 7655429 7658031 ECH