LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto5g1137	ATGGCAGATACCCGGAACCACGCTGCGAATCCCTCTGTATTGAAGTTGAACAAGTTCATTTCGCCATCGAACATAAGAGACAATAAACGCAAACCCCGACCACCTGGTCCACCCGCCTTGCCTATCATAGGCCATCTTCATCTCTTGAAGCAACCCATTCACCGTAGTATCCACAAACTCAGCCACACCTACGGCCCAATCATGTCCCTCCGCTTTGTAGAAGAATGCTTAGTCAAAAAGAACGACATCGTTTTCGCAAACCGCCCCCTCACGCTTGCCGGCAAATATCTCAGTTACGACTACAAATCCATGGCTTTCGCTCCCTACGGTGATCACTGGAGAGGCCTACGCCGCATCACCAATCAGGAACTTTCCTCCACCAGCCGACTCGCCTTGTCCAGCCCCGCACGTGAGGACGAAGTCCTCATTTTGTTAAAGCAATTGTTCGACAAGTGCAGAGGAGGAGGATGGGCCCAGGTGGAGCCCAGACACAGATTTGTGGACCTTATTTTTGATGTGATGGTGAGGATGATCTCAGGGAAGAGGTATTGTGGGACGGACGTGGCGTCCAAGGAAGCCATGGAGTTCAAGAACTCTATGGATGAGATCTTCGAGCTACTTGATCTCAGTATGCTTGACCTTTTCCCAATTCTACAGTGGCTTGATCCCTTTGGGGTGGTCAAGAGGATGAAGAAGGCGATGATGGTGGAGGACAATTTTCTTCAGAGCCTCCTTGATGAGAATAGGAGAAAGGGAAACGATGAGAGGAAGTACATGACGTTGGTCGAAGCTATGTTGTCGCAAAAACATACAGATCCCGTGTTTTTCTCCGATGACAATATCAAAGCAATTTCAGGGGCAATAATAGCAGCAGGGACGGAAACATCGGCTTCAACGATGGAATGGGCACTTGCAAATCTGTTGAAGCATCCAGAAGTGATGAAAAAATTGAAGGCAGAGATAGAGAGTGAAGTAGGAACAGAACGATTTTTGGATGAATCAGACATAGGGAAGCTGCCATACTTGCAGAACGTAGTTTTAGAGACTCTTCGTCTATATCCAGCGGGTGGGCTTGGGCTTCCCCGTATGAACTCGGAGGACTGTACAGTGGGGGGTTACCACATACCCAAAGGAACAATGCTAATGGTGAATGTGTGGGCGATGCAGAGGGATCCAAAGCTATGGAGAGATGCGAGTAGGTTTATGCCAGAGAGGATGGAGAGTGGGCAAACAGGGTATGGGTTCATTCCATTTGGTGCGGGAAGGAGGATATGCCCTGGGGCTAATATAGCCAAGAGACTCATGGCTTTGACTATGGGGTTGCTGGTTCAGGCCTTTGAGTGGAAGAAAATTGGGGATGGAGAAATTGACATGATGGAGGGAGGTGGCCTTACGCTTCCCAAAGTTGAGCCTTTAGTTGCACTCATAAGGCCCCGCCCAGAGATGATCACCCTTCTCTCCCAATTATCAAGTAACACAGATCATTAA	1488	0.4879	MADTRNHAANPSVLKLNKFISPSNIRDNKRKPRPPGPPALPIIGHLHLLKQPIHRSIHKLSHTYGPIMSLRFVEECLVKKNDIVFANRPLTLAGKYLSYDYKSMAFAPYGDHWRGLRRITNQELSSTSRLALSSPAREDEVLILLKQLFDKCRGGGWAQVEPRHRFVDLIFDVMVRMISGKRYCGTDVASKEAMEFKNSMDEIFELLDLSMLDLFPILQWLDPFGVVKRMKKAMMVEDNFLQSLLDENRRKGNDERKYMTLVEAMLSQKHTDPVFFSDDNIKAISGAIIAAGTETSASTMEWALANLLKHPEVMKKLKAEIESEVGTERFLDESDIGKLPYLQNVVLETLRLYPAGGLGLPRMNSEDCTVGGYHIPKGTMLMVNVWAMQRDPKLWRDASRFMPERMESGQTGYGFIPFGAGRRICPGANIAKRLMALTMGLLVQAFEWKKIGDGEIDMMEGGGLTLPKVEPLVALIRPRPEMITLLSQLSSNTDH	495

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto5g1137	495	PANTHER	CYTOCHROME P450 82C3-RELATED	29	488	-	-
	Sto5g1137	495	PRINTS	P450 superfamily signature	291	308	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto5g1137	495	PRINTS	P450 superfamily signature	344	355	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto5g1137	495	PRINTS	P450 superfamily signature	416	425	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto5g1137	495	PRINTS	P450 superfamily signature	425	436	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto5g1137	495	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	418	427	IPR017972	GO:0005506\|GO:0016705
	Sto5g1137	495	Pfam	Cytochrome P450	34	469	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto5g1137	495	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	29	488	-	-
	Sto5g1137	495	PRINTS	E-class P450 group I signature	61	80	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto5g1137	495	PRINTS	E-class P450 group I signature	169	187	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto5g1137	495	PRINTS	E-class P450 group I signature	280	297	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto5g1137	495	PRINTS	E-class P450 group I signature	300	326	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto5g1137	495	PRINTS	E-class P450 group I signature	343	361	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto5g1137	495	PRINTS	E-class P450 group I signature	384	408	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto5g1137	495	PRINTS	E-class P450 group I signature	415	425	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto5g1137	495	PRINTS	E-class P450 group I signature	425	448	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto5g1137	495	SUPERFAMILY	Cytochrome P450	34	479	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto5g1137	495	Gene3D	Cytochrome P450	20	474	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto5g1137	Sto-Chr5	7609539	7622776	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto5g1137	34	486	Cytochrome P450	AT4G37430	41.770	3.69e-131	388

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto5g1137	-		-	tcc:18592041	471.085

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto5g1137	5	7609539	7622776	Sto5g1137	5	7609539	7622776	ECH