Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1134 ATGCCCGACTACCTAGAGAAAGTTCAGAAAGACATAAGTGCTAACGCGAGAGGAATATTGATCGATTGGTTAGTGGAGGTTGCTGAGGAATACAAGCTTCTCTCAGACACTCTTCATCTCTCGGTTTCCTACATCGATAGATTCCTCTCCGCTAATTCTGTCAGTAGGCAGAGGCTTCAGTTGCTGGGCGTTTCATCCATGTTCATTGCATCGTAA 216 0.4537 MPDYLEKVQKDISANARGILIDWLVEVAEEYKLLSDTLHLSVSYIDRFLSANSVSRQRLQLLGVSSMFIAS 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1134 71 PANTHER CYCLINS 3 71 IPR039361 -
Sto5g1134 71 CDD CYCLIN 17 71 IPR013763 -
Sto5g1134 71 Gene3D - 2 71 - -
Sto5g1134 71 Pfam Cyclin, N-terminal domain 2 71 IPR006671 -
Sto5g1134 71 ProSitePatterns Cyclins signature. 17 48 IPR006671 -
Sto5g1134 71 PANTHER CYCLIN-A1-1 3 71 - -
Sto5g1134 71 SUPERFAMILY Cyclin-like 2 71 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1134 Sto-Chr5 7598716 7598931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1134 3 71 Core Cell Cycle Gene Families AT5G43080 75.362 4.24e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1134 K06627 - sind:105155568 123.25