LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto5g1132	ATGGATTCTCATTCCCGAGCAGATGAGTCCCAAGAAGATGAAAAGGATGAAGAAATGAACCGCTTGCTTCAACCCCAATCTGAATCACAACTATTATTATCATCGGACGACGAAGAGGTCGCTTATGAAGCGGGGGAGAAAATTCTCATGGTAGATTTAGATTCTGTCGATGATAAGGACTCGACGACGGTGCCACCTTTCTCGTGGAAGAAGCTATGGCTTTTCACGGGACCGGGGTTCTTGATGAGCATAGCTTTTCTGGATCCGGGGAATCTCGAAGGAGATCTTCAGGCTGGAGCCATCGCCGGCTACTCCCTACTCTGGCTGTTGATGTGGGCCACAATTATGGGCTTGCTGATTCAGCTTCTTTCCGCGAGGATTGGGGTGGTCACTGGCCGGGACCTGGCGGAGCTATGCAGGGACGAATATCCTAATTGGGCTAGATTGGTGTTGTGGTTCATGGCGGAGCTGGCTTTGATTGGTGCCGATATTCAAGAGGTCATTGGGAGTGCAATCGCTATACAAATTCTTAGCCATGGGGTGTTGCCGCTTTGGGCTGGAGTCGTAATTACTGCTTCCGATTGTTTCGTCTTTTTATTTCTTGAGAACTATGGAGTAAGGAAGCTGGAAGCTGTTTTTGCAGTTCTCATTGCAACAATGGCTCTTTCTTTTGCTTGGATGTTTGGTGACACAAAACCTAGTGGAAAAGAACTCTTGATGGGTATTTTGGTTCCAAGACTTAGCTCAAAAACAATTCGCCAGGCTGTGGGGGTTGTGGGTTGTGTCATTATGCCTCACAACGTATACCTACATTCAGCTTTGGTGCAATCAAGGAAAACTGATCCCAAGAAAAAAGGCCAGGTGCAGGAGGCTCTTAACTACTATTCCATTGAGTCAACAGTTGCTCTTTCAGTCTCCTTCATGATCAACCTATTTGTCACAACGGTTTTTGCTAAGGGGTTTTACAGTACAAAGCAGGCCAATAGCATAGGGTTGGTAAATGCAGGACAATATCTTCAGGAAAAGTATGGAGGAGGACTCTTCCCAATTCTTTATATATGGGGTATTGGGTTATTGGCAGCTGGACAGAGTAGCACCATCACTGTTTTTAATACATCTGAAGCATCACTGGACATTCTCAATGAATGGCTTAATGTGCTTCAGTCAATGCAAATTCCTTTTGCACTAATTCCCCTTCTCACCTTGGTCACCAAAGAGCAGGTCATGGGGACTTTTAAGGTTGGGCCCGTTCTTGAGAGAGTAGCATGGACTATTGCTGCGCTGATAATGGTGATCAATGGGTATCTCTTGTTAGATTTCTTCTTTTCTGAAGTGAACGGCCCGCTGCTTGGTTTCATAGTGTGCTTCTGCACAGCTGCTTACGTGGCATTCATTGTATATTTGGTTTCACTGAGTGGTGCTGTATCTTCCACTTGGATTAATCTACTTCCCAAGGGATTCTCTTCTGGAATTAAGTCAATAAATTCAGACACCGTGGTAAAAACTGGAGATAGTACTACAAACTCCTGCTAG	1533	0.4527	MDSHSRADESQEDEKDEEMNRLLQPQSESQLLLSSDDEEVAYEAGEKILMVDLDSVDDKDSTTVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATIMGLLIQLLSARIGVVTGRDLAELCRDEYPNWARLVLWFMAELALIGADIQEVIGSAIAIQILSHGVLPLWAGVVITASDCFVFLFLENYGVRKLEAVFAVLIATMALSFAWMFGDTKPSGKELLMGILVPRLSSKTIRQAVGVVGCVIMPHNVYLHSALVQSRKTDPKKKGQVQEALNYYSIESTVALSVSFMINLFVTTVFAKGFYSTKQANSIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITVFNTSEASLDILNEWLNVLQSMQIPFALIPLLTLVTKEQVMGTFKVGPVLERVAWTIAALIMVINGYLLLDFFFSEVNGPLLGFIVCFCTAAYVAFIVYLVSLSGAVSSTWINLLPKGFSSGIKSINSDTVVKTGDSTTNSC	510

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto5g1132	510	PRINTS	Natural resistance-associated macrophage protein signature	151	177	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Sto5g1132	510	PRINTS	Natural resistance-associated macrophage protein signature	181	200	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Sto5g1132	510	PRINTS	Natural resistance-associated macrophage protein signature	206	227	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Sto5g1132	510	PRINTS	Natural resistance-associated macrophage protein signature	255	278	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Sto5g1132	510	PRINTS	Natural resistance-associated macrophage protein signature	362	381	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Sto5g1132	510	MobiDBLite	consensus disorder prediction	1	36	-	-
	Sto5g1132	510	PANTHER	BNAC08G04640D PROTEIN	33	368	-	-
	Sto5g1132	510	PANTHER	BNAC08G04640D PROTEIN	369	480	-	-
	Sto5g1132	510	MobiDBLite	consensus disorder prediction	1	22	-	-
	Sto5g1132	510	PANTHER	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	33	368	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Sto5g1132	510	PANTHER	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	369	480	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Sto5g1132	510	TIGRFAM	nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family	70	368	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Sto5g1132	510	Pfam	Natural resistance-associated macrophage protein	93	370	IPR001046	GO:0016020\|GO:0030001\|GO:0046873

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto5g1132	Sto-Chr5	7589540	7592336	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto5g1132	8	472	Inorganic Solute Cotransporters	AT1G47240	73.069	0.0	733

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto5g1132	K21398		-	zju:107420546	780.015

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto5g1132	5	7589540	7592336	Sto5g1132	5	7589540	7592336	ECH