Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1110 ATGGAGAATTACCTGAATGAGAACTTTGGGGATGTGAAACCTAAGAACTCGTCGGAGGAGGCGCTTCAGCGATGGAGAAAGCTGTGTTGGCTTGTGAAGAACCGTAAGAGGAGGTTTCGATTCACTGCTAATCTCTCCAAGCGATTTGAAGCGGAGGCTATCAGACGCTCCAATCAGGAGAAGTTCAGAGTTGCAGTCTTGGTTTCACAAGCTGCACTTCAGTTTATCCATGGTCTAAATTTGTCGAGTGAATACACTGCACCAGAAGAAGTTAGAGCTGCGGGTTTTGAAATTTGTGCTGATGAGTTGGGATCAATAGTCGAAGGCCGAGATGTGAAGAAGTTGAAAATTCATGGAGGGGTTGAGGGTATTTCAAACAAGCTCACTACCTCAATGGATGATGGGTTATCAACATTTGAGCAACTTCTAAATAAGAGGAAAgaaatttatggaattaatAAATTCACTGAAAGCCCAGTCcgggggttttggatttttgtATGGGAAGCCCTTCAAGATACGACCCTCATGATACTTGCTGTTTGTGCCTTTGTCTCTTTGTTGGTTGGCATAGTAATGGAAGGATGGCCCAAGGGCGCGCATGATGGAATTGGTATCGTTGCAAGCATATTGCTCGTTGTGTTTGTCACCGCCTCTAGTGATTATAGACAGTCATTGCAGTTTAAGGATCTAGATAgggagaagaaaaaaattacagtTCAGGTCACACGAAATGGATGTAGACAGAAGATGTCTATATATGATTTACTTCCTGGTGATCTTGTTCACCTTAATATTGGAGATCAGGTCCCTGCTGATGGACTTTTTGTGTCAGGTTTCTCTGTGTTGGTAAACGAATCAAGTTTGACTGGAGAGAGTGAACCAGTGAGTGTCCATGCTCGTAATCCTTTCCTTCTTTCTGGAACTAAAATTCAGGATGGATCTTGCAGGATGCTTGTGACTACCGTTGGAATGAGAACCCAGTGGGGCAAACTAATGGCCACTCTAAGTGAAGGGGGAGATGATGAAACTCCTTTGCAGGTAAAGCTCAATGGCGTAGCTACCATTATTGGTAAAATAGGCCTTTTCTTTGCTGTTGTGACTTTTGCAGTTTTGGTCCAAGGACTATTTAACCACAAGCTGCAAGAAGGGTCACAATGGAGGTGGTCTAGCGGCGATGCAAGGGAAATTTTGGAATTCTTTGCTATTGCTGTTACTATTGTTGTTGTTGCAGTTCCTGAAGGTTTACCCTTAGCTGTAACATTGAGCCTTGCTTTTGCaatgaaaaaaatgatgaacGATAAGGCACTTGTCCGTCATTTGGCTGCTTGTGAGACAATGGGATCCGCCACTACTATTTGTAGTGACAAGACTGGTACTTTAACCACTAACCATATGACTGTTGTGAAAGCTTGCATATGTGGGAAGATTAAGGATGCAGGGAGCTCTGAAATTTCTTCTGATTTCTCGTCTGATCTTCCTAATTCTGTTCTGAAAATTCTGCTTCAGTCATTATTTAATAACACTGGAGGAGAGGTTGTCAAAGACAAAAATAACAAGATTGAGATTCTGGGAACACCCACTGAGAGTGCACTCTTGGAATTTGGGCTATCCCTTGGTGGTGATTTTATGGAGGAACGACGAGCGTCGAAAATTGTCAGAGTGGAACCCTTTAACTCTGTAAAGAAGCGCATGGGAGTGGTTCTAGAACTTCCTGATGGTGCCTTCAGAGCACACTGCAAAGGTGCTTCTGAAATAATTCTGGCTGCATGTGACACAGTTTTAGATTCAGATGGCAAGGTTGTTCCGCTTGATGAAGAATCCATCAATCATTTGAATGATACGATTGAAAAGTTTGCCAGTGAAGCTCTCCGAACTCTTTGCCTTGCTTACATGGAGATTGGAAGTATAGCAATTGAAGGCCCTGACTTCCGTGAGAAGAGTGAGCAGGAATTGCATGATTTAATTCCCAAAATTCAGGTAATGGCTCGATCATCACCTATGGATAAGCATACCCTGGTGAAACACTTAAGGACAACATTTGAAGAAGTAGTTGCAGTTACTGGTGACGGTACAAACGACGCTCCTGCACTTCACGAAGCAGATATTGGACTTGCAATGGGCATTGCTGGAACTGAGGTAGCGAAAGAAAGTGCAGATGTGATAATACTAGATGATAACTTTTCCACTATTGTGACTGTTGCTAAATGGGGCCGTTCAGTCTACATAAACATACAAAAATTTGTGCAGTTCCAGCTAACTGTAAATGTTGTTGCTTTAATTGTCAACTTCTCTTCTGCCTGTTTGACTGGAAATGCGCCCCTCACCGCGGTCCAACTCCTATGGGTAAACATGATCATGGACACTTTAGGAGCACTTGCACTAGCAACCGAACCTCCTAATGATGATTTGATGAAAAGGCCACCTGTTGGTAGGAAAGGAAACTTCATCAGTAATGTAATGTGGAGGAATATCTTGGGGCAGTCTTTATATCAGTTTGCTATAATCTGGTTTCTCCAGACCAGAGGAAAAATAGCTTTTCATCTTGATGGCCCGGATTCTGATTTGATATTGAACACTCTCATTTTCAATTCATTTGTATTCTGTCAGGTTTTCAATGAGATCAGTTCGAGAGAGATGGAGAAGATAAATGTGTTTAAGGGTATACTGGAGAATTACGTATTTGTGGCTGTCCTCACTTGCACTGTCCTCTTTCAAATCATAATTGTCGAATTCTTGGGCACATTTGCAAATACATCTCCCCTTAGTTTGAAGCAGTGGTTTGGTAGTGTTTTGTTTGGATTCCTTGGAATGCCAATTGCAGCAGCTTTAAAAATGATCCCAGTGTAA 2850 0.414 MENYLNENFGDVKPKNSSEEALQRWRKLCWLVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTAPEEVRAAGFEICADELGSIVEGRDVKKLKIHGGVEGISNKLTTSMDDGLSTFEQLLNKRKEIYGINKFTESPVRGFWIFVWEALQDTTLMILAVCAFVSLLVGIVMEGWPKGAHDGIGIVASILLVVFVTASSDYRQSLQFKDLDREKKKITVQVTRNGCRQKMSIYDLLPGDLVHLNIGDQVPADGLFVSGFSVLVNESSLTGESEPVSVHARNPFLLSGTKIQDGSCRMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGLFNHKLQEGSQWRWSSGDAREILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICGKIKDAGSSEISSDFSSDLPNSVLKILLQSLFNNTGGEVVKDKNNKIEILGTPTESALLEFGLSLGGDFMEERRASKIVRVEPFNSVKKRMGVVLELPDGAFRAHCKGASEIILAACDTVLDSDGKVVPLDEESINHLNDTIEKFASEALRTLCLAYMEIGSIAIEGPDFREKSEQELHDLIPKIQVMARSSPMDKHTLVKHLRTTFEEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRPPVGRKGNFISNVMWRNILGQSLYQFAIIWFLQTRGKIAFHLDGPDSDLILNTLIFNSFVFCQVFNEISSREMEKINVFKGILENYVFVAVLTCTVLFQIIIVEFLGTFANTSPLSLKQWFGSVLFGFLGMPIAAALKMIPV 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1110 949 Gene3D - 169 510 - -
Sto5g1110 949 Gene3D - 699 948 - -
Sto5g1110 949 Pfam Cation transport ATPase (P-type) 515 594 - -
Sto5g1110 949 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 659 769 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto5g1110 949 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 395 478 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto5g1110 949 Gene3D - 17 77 - -
Sto5g1110 949 Pfam E1-E2 ATPase 237 432 - -
Sto5g1110 949 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Sto5g1110 949 PRINTS P-type cation-transporting ATPase superfamily signature 285 299 - -
Sto5g1110 949 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Sto5g1110 949 PRINTS P-type cation-transporting ATPase superfamily signature 688 707 - -
Sto5g1110 949 PRINTS P-type cation-transporting ATPase superfamily signature 712 724 - -
Sto5g1110 949 PRINTS Sodium/potassium-transporting ATPase signature 204 224 - -
Sto5g1110 949 PRINTS Sodium/potassium-transporting ATPase signature 447 468 - -
Sto5g1110 949 PRINTS Sodium/potassium-transporting ATPase signature 578 596 - -
Sto5g1110 949 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 460 638 IPR023299 GO:0000166
Sto5g1110 949 PANTHER CATION TRANSPORTING ATPASE 636 948 - -
Sto5g1110 949 PANTHER CATION TRANSPORTING ATPASE 3 635 - -
Sto5g1110 949 PANTHER CALCIUM-TRANSPORTING ATPASE 3 635 - -
Sto5g1110 949 PANTHER CALCIUM-TRANSPORTING ATPASE 636 948 - -
Sto5g1110 949 Pfam haloacid dehalogenase-like hydrolase 672 728 - -
Sto5g1110 949 SUPERFAMILY HAD-like 630 736 IPR036412 -
Sto5g1110 949 SUPERFAMILY Calcium ATPase, transmembrane domain M 118 948 IPR023298 -
Sto5g1110 949 Gene3D - 511 656 IPR023299 GO:0000166
Sto5g1110 949 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Sto5g1110 949 SMART Cation_ATPase_N_a_2 120 191 IPR004014 -
Sto5g1110 949 Pfam Cation transporting ATPase, C-terminus 773 947 IPR006068 -
Sto5g1110 949 Pfam Cation transporter/ATPase, N-terminus 119 186 IPR004014 -
Sto5g1110 949 SUPERFAMILY Calcium ATPase, transduction domain A 238 334 IPR008250 -
Sto5g1110 949 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 112 632 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Sto5g1110 949 Gene3D - 210 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1110 Sto-Chr5 7462401 7467857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1110 1 949 Primary Pumps ATPases AT4G37640 70.629 0.0 1427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1110 K01537 - han:110895175 1230.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1110 5 7462401 7467857 Sto5g1110 5 7462401 7467857 ECH