Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1094 ATGGATACGAACTCGGATGCGTTCTGCTCCGGTACTTCTGAGATAGAATCACTGTCTTACgtCCTTGATTTCTTTGGAGTGGACCCAACAAAAGGTCTTTCGGATACTCAGGTGGCACAACATGCTAGACTTTATGGTACCAACGGGGCTCCTTTTTGGAAATTGGTATTGAAACAATTTGATGATTTGCTTGTAAAGATTTTAATTGCAGCTGCAATTATATCTTTCATTCTAGCTTTAATCAATGGAGAAACAGGGTTGATGGCATTTCTGGAGCCTTCTGTTATTCTAATGATATTGGCTGCAAACGCAGCTGTGGGGGTGATTACAGAAACAAATGCTGAAAAAGCTCTTgagGAGCTACGTGCCTATCAAGCTGATATTGCAACAGTACTTAGAAATGGTAACGGGAAGCATTTAAGTTGTTATTCCATACTCCCTGCAACTGAAATTGTTCCCGGTGATATTGTGGAAGTTTCTGTTGGGTGCAAAGTTCCTGCTGATATGAGGATGATTGAGATGCTGAGTAATCAAGTACGTGTTGATCAGGCTATTCTGACTGGTGAGAGCAACTCTGTGGGAAAAGAGCTCGAAACTACTACAGCAACAAAGGCTGTATACCAAGACAAAACAAATATATTGTTCTCGGGAACAGTTGTGGTTGCTGGAAGGGCAAGAGCAATTGTGGTGGGGGTTGGTCATAACACTGCCATGGGCAGCATACGTGATTCAATGTTGCAAACAGAAGATGAGGTGACACCATTGAAGAAAAAGCTGGATGAGTTCGGTACCTTTTTGGCCAAGGTTATTGCAGGGATTTGCGTATTGGTGTGGATTGTGAATATTGGTCACTTTCGCGACCCATCCCATGGGGGTTTCTTGAGTGGtgcaattcattattttaagATTGCAGTTGCACTGGCAGTTGCAGCAATTCCTGAAGGGCTTCCTGCTGTTGTTACAACgTGTTTGGCTCTTGGAACAAAGCGGATGGCTAGGTTGAATGCTATTGTACGGTCTTTACCATCTGTTGAGACATTGGGCTGCACTACAGTAATTTGCAGCGACAAAACAGGAACTTTGACAACCAATATGATGTCTGTAGTGAAGGTTTGCGTGGTTCACTCTATAAAACATAGTCCTGTAGTCGCTGAATACAGTGTTAGTGGAACCACATACGCACCTGAAGGCATAATCTTTGACAGTTCAGGAATGCAGCTTGACTTTCCAGCTCAGCAGCCATGTCTACTTCACACAGCAATGTGTTCTGCCCTATGCAATGAATCCACCCTGCAGTATAATCCTGATAAAGGGAAGTATGAAAAAATTGGTGAGTCAACTGAAGTGGCACTTCGTGTCCTGGCAGAAAAGGTTGGTCTCCCTGGTTTTGATTCTATGCCTTCAGCTTTGAATATATTGAGCAAGCATGAACGAGCATCTTACTGTAATCATTATTGGCAGGAACAATTTAGAAAGATAGATCTTTTGGATTTTTCTCGGGATCGGAAAATGATGAGTGTCCTTTGCAGTCGCAATCAGCTGCATGTGTTGTTTTCAAAGGGTGCTCCGGAGAGTATAATGTCTAGATGTACAACCATCATGTGCAATGGTGATGGTTCCATTTTGCCACTCACTGCTGATATTCGAGCAGAGCTAGACTCAAGGTTCCAAAGTTTTGCAGGAAAAGAAACACTGAGATGCCTAGGTTTAGCCCTGAAATGGATGCCCTCTGGTCAACAACGTCTTTCCTATGATGATGAGAAAGATCTTACATTTATTGGGTTGGTTGGGATGCTTGATCCACCAAGAGATGAAGTAAGAAATGCAATGCTTTCATGCATGACTGCTGGGATACGAGTTATAGTTGTCACTGGGGATAACAAGTCCACTGCAGAGTCACTTTGCCGTAAGATAGGTGCTTTTGACCATATGTTGGAGTTTTCTGAACATTCTTACACTGCTTCGGAGTTTGAAGAACTTTCAGCTATGCAGAAAACTCTAGCTTTGCAACGAATGGCTCTCTTCACCAGGGTTGAGCCATCTCATAAAAGGATGCTGGTTGAAGCATTACAGCTCCAGAATGAAGTGGTTGCTATGACTGGTGATGGTGTCAATGATGCACCAGCACTGAAGAAGGCAGACATAGGAATTGCTATGGGTTCAGGGACAGCTGTTGCCAAGAGTGCTTCAGACATGGTGCTGGCTGATGACAACTTTGCTTCGATTGTTGCGGCTGTAGCAGAGGGAAGGGCCATATACAGCAATACAAAACAGTTTATTAGATACATGATCTCTTCTAATATTGGTGAAGTAGTCTGTATATTTGTGGCAGCTGTGCTTGGAATACCTGATACCCTTGCCCCTGTCCAGCTGCTTTGGGTCAATTTGGTTACTGATGGATTGCCTGCCACTGCTATCGGATTTAATAAGCCAGACTCTGATGTGATGAAGGCCAAACCTCGGAAGGTAAATGAAGCAGTTGTTACAGGGTGGCTGTTCTTCCGTTATCTAGTAATTGGAGCTTATGTTGGCCTCGCTACTATTGCTGGTTTTATTTGGTGGTTTGTTTACTCTGACAGTGGCCCTAAACTACCATATACTGAACTGatgAAATTTGACACTTGCCCAACAAGGCAGACAACTTATCCATGCAGTATATTTGATGATCGACATCCATCTACTGTAGCAATGACTGTGCTTGTTGTTGTGGAGATGTTCAATGCTTTGAACAATCTTAGTGAGAATCAATCTCTTTTGGTTATCCCTCCATGGAGTAACTTATGGCTTGTTGGGTCAATAGTTCTTACCATGCTTCTTCACATACTAATTTTGTATGTGCACCCACTCTCTGTTCTTTTCTCTGTAACACCATTATCCTGGGATGACTGGATGGTTGTCCTCTATCTTTCATTACCAGTTATATTCATTGATGAGGTGTTAAAGTTCTTCTCCAGACATCCCattgGTCTGAGGTTCAGATTATGGTTCAGGAGACCTGATTTACTTCCAAAAAGAGAATTGCGTGATAATCCGCATTTAACCAATTTGCTTACGGGAGTACCTCAAAGGTACGCATGGCGAGGACTGTCTTTTGCTGAAGCAGACTCTGCTCTATGA 3117 0.4264 MDTNSDAFCSGTSEIESLSYVLDFFGVDPTKGLSDTQVAQHARLYGTNGAPFWKLVLKQFDDLLVKILIAAAIISFILALINGETGLMAFLEPSVILMILAANAAVGVITETNAEKALEELRAYQADIATVLRNGNGKHLSCYSILPATEIVPGDIVEVSVGCKVPADMRMIEMLSNQVRVDQAILTGESNSVGKELETTTATKAVYQDKTNILFSGTVVVAGRARAIVVGVGHNTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLSGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVVKVCVVHSIKHSPVVAEYSVSGTTYAPEGIIFDSSGMQLDFPAQQPCLLHTAMCSALCNESTLQYNPDKGKYEKIGESTEVALRVLAEKVGLPGFDSMPSALNILSKHERASYCNHYWQEQFRKIDLLDFSRDRKMMSVLCSRNQLHVLFSKGAPESIMSRCTTIMCNGDGSILPLTADIRAELDSRFQSFAGKETLRCLGLALKWMPSGQQRLSYDDEKDLTFIGLVGMLDPPRDEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDHMLEFSEHSYTASEFEELSAMQKTLALQRMALFTRVEPSHKRMLVEALQLQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFASIVAAVAEGRAIYSNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKPDSDVMKAKPRKVNEAVVTGWLFFRYLVIGAYVGLATIAGFIWWFVYSDSGPKLPYTELMKFDTCPTRQTTYPCSIFDDRHPSTVAMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVGSIVLTMLLHILILYVHPLSVLFSVTPLSWDDWMVVLYLSLPVIFIDEVLKFFSRHPIGLRFRLWFRRPDLLPKRELRDNPHLTNLLTGVPQRYAWRGLSFAEADSAL 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1094 1038 Coils Coil 114 134 - -
Sto5g1094 1038 SUPERFAMILY Calcium ATPase, transduction domain A 143 244 IPR008250 -
Sto5g1094 1038 CDD P-type_ATPase_SERCA 21 985 - -
Sto5g1094 1038 Pfam Cation transport ATPase (P-type) 424 533 - -
Sto5g1094 1038 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 361 598 IPR023299 GO:0000166
Sto5g1094 1038 SUPERFAMILY HAD-like 587 748 IPR036412 -
Sto5g1094 1038 Pfam E1-E2 ATPase 125 333 - -
Sto5g1094 1038 Pfam haloacid dehalogenase-like hydrolase 592 714 - -
Sto5g1094 1038 Pfam Cation transporter/ATPase, N-terminus 17 75 IPR004014 -
Sto5g1094 1038 Gene3D - 351 744 IPR023214 -
Sto5g1094 1038 PRINTS H+-transporting ATPase (proton pump) signature 672 688 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto5g1094 1038 PRINTS H+-transporting ATPase (proton pump) signature 700 716 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto5g1094 1038 PRINTS H+-transporting ATPase (proton pump) signature 731 756 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto5g1094 1038 PANTHER CALCIUM-TRANSPORTING ATPASE 16 989 - -
Sto5g1094 1038 SFLD Haloacid Dehalogenase 335 752 - -
Sto5g1094 1038 TIGRFAM ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 56 855 IPR005782 GO:0005388|GO:0006816|GO:0016021
Sto5g1094 1038 SMART Cation_ATPase_N_a_2 14 80 IPR004014 -
Sto5g1094 1038 Pfam Cation transporting ATPase, C-terminus 784 983 IPR006068 -
Sto5g1094 1038 Gene3D - 31 246 - -
Sto5g1094 1038 SFLD p-type atpase 335 752 IPR044492 -
Sto5g1094 1038 ProSitePatterns E1-E2 ATPases phosphorylation site. 356 362 IPR018303 -
Sto5g1094 1038 PRINTS P-type cation-transporting ATPase superfamily signature 182 196 - -
Sto5g1094 1038 PRINTS P-type cation-transporting ATPase superfamily signature 354 368 - -
Sto5g1094 1038 PRINTS P-type cation-transporting ATPase superfamily signature 594 605 - -
Sto5g1094 1038 PRINTS P-type cation-transporting ATPase superfamily signature 616 626 - -
Sto5g1094 1038 PRINTS P-type cation-transporting ATPase superfamily signature 700 719 - -
Sto5g1094 1038 PRINTS P-type cation-transporting ATPase superfamily signature 723 735 - -
Sto5g1094 1038 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 986 IPR023298 -
Sto5g1094 1038 PANTHER SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 3 16 989 - -
Sto5g1094 1038 Gene3D - 364 601 IPR023299 GO:0000166
Sto5g1094 1038 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 670 785 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto5g1094 1038 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 95 380 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto5g1094 1038 Gene3D - 58 985 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1094 Sto-Chr5 7349049 7368823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1094 16 1010 Primary Pumps ATPases(2) AT1G10130 82.218 0.0 1676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1094 K05853 - gmx:100783509 1768.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1094 5 7349049 7368823 Sto5g1094 5 7349049 7368823 ECH