Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1033 ATGACTTCTGTTTCTTTCAACCCTCTTACTAGCAGCAGTACGTCTGATGATGATCATCAAAACCACCTCTTCATGTCTCCTAATTCTACTCTGGAGAATGGTGGAGTAGTATTGCATGGTGGATCAAGCAATAGTATGGAAGATGGGCATAATTTAGGTGGGAGGGAGGAGGAAGAAATCAGCAGAAGAGGAGAGTACGAGGAGTCTGCAAAATGGATGTCTTCTAAGATGAGGTTGATGAGAAAAATGATGACCCCTAATACTGCCAATCCTCCTAAACCAtccaataatattaataatactcCAACATTCCAAACTCATGACCACCATAAATTCCAAACTACCCCTTCTTCTCACCACAGAATCACCACCACCGCCACTAGGGTTTGCGCCGATTGTAACACAACCACCACCCCACTTTGGAGGGGTGGCCCTAAGGGTCCTAAGTCTCTTTGCAATGCGTGTGGGATAAGGCAGAGGAAGGCAAGAAGGGCATTAATGGCAGAAGGAGGTGGGAATCCCAATTATTCAAGAGTGAATAGCAAGGAGAAGAAGGGTAGTCGTGGAAACCATTTTGTACAATTCAAGAATAAGTGGAAGGGTACAACATCACAGGGATCAGACAGGAGAAACAACgttaacattaataataataataataataatggattcaaggattttggttttggtttcAGTAGTAACGGTAACGGTAACGGTAACGGCTCTGCGGTTGATCACCAAGTGTTTCCGCGGGATGATGTTGCTGAGGCGGCGCTGCTTCTCATGGATTTGTCTTGTGCCTTTCTTCCCATTTAA 816 0.4179 MTSVSFNPLTSSSTSDDDHQNHLFMSPNSTLENGGVVLHGGSSNSMEDGHNLGGREEEEISRRGEYEESAKWMSSKMRLMRKMMTPNTANPPKPSNNINNTPTFQTHDHHKFQTTPSSHHRITTTATRVCADCNTTTTPLWRGGPKGPKSLCNACGIRQRKARRALMAEGGGNPNYSRVNSKEKKGSRGNHFVQFKNKWKGTTSQGSDRRNNVNINNNNNNNGFKDFGFGFSSNGNGNGNGSAVDHQVFPRDDVAEAALLLMDLSCAFLPI 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1033 271 MobiDBLite consensus disorder prediction 196 219 - -
Sto5g1033 271 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 122 164 - -
Sto5g1033 271 MobiDBLite consensus disorder prediction 1 69 - -
Sto5g1033 271 ProSitePatterns GATA-type zinc finger domain. 130 155 IPR000679 GO:0006355|GO:0043565
Sto5g1033 271 MobiDBLite consensus disorder prediction 168 219 - -
Sto5g1033 271 SMART GATA_3 124 187 IPR000679 GO:0006355|GO:0043565
Sto5g1033 271 ProSiteProfiles GATA-type zinc finger domain profile. 124 160 IPR000679 GO:0006355|GO:0043565
Sto5g1033 271 Pfam GATA zinc finger 130 163 IPR000679 GO:0006355|GO:0043565
Sto5g1033 271 Gene3D - 125 220 IPR013088 GO:0006355|GO:0008270
Sto5g1033 271 MobiDBLite consensus disorder prediction 1 49 - -
Sto5g1033 271 MobiDBLite consensus disorder prediction 50 69 - -
Sto5g1033 271 CDD ZnF_GATA 129 182 IPR000679 GO:0006355|GO:0043565
Sto5g1033 271 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 10 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1033 Sto-Chr5 6926891 6928421 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1033 68 161 C2C2-Gata Transcription Factor Family AT5G56860 43.548 2.81e-19 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Sto5g1033 GATA 4.9e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1033 - - gmx:100780326 160.229