Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1020 ATGGGTGCTTCAGGTAAATGGGTTAGAGCATTAATCGGACTCAAGAAGCCCGATAAGGATGACCATCCCAAGGAAGGTGGCAAGACCAAGAAGTGGAGGCTATGGAGGACTTCCTCTGCCGATATGCCTTCCTGGAAAGCTTTCAAAGCAAACCACAGAGCCGCCTCCGAGGCTTCTGATTCTCCTCTTGTTCCTGATGCTTTCACTGCTGCTATGGCCACTGTCGTTCGAGCTCCCCCTAAGGATTTCAGACTTGTTAGGCAAGAATGGGCCGCCATTAGGATTCAAACTGCTTTTCGCGGCTTCTTGGCAAGAAGGGCTTTAAGGGCGTTGAAAGGAGTGGTAAGGCTTCAAGCTCTGGTGCGAGGTAGACAAGTGAGGAAGCAAGCTGCTGTCACACTGAGGTGCATGCAGGCTCTGGTTCGTGTTCAAGCCCGAGTAAGGGCTCGTCGTGTCCGAATGTCCATAGAGGGTCAAGCAGTGCAAATGATGCTCAATGAACGTCGTACCCAAGCCGAACTCTTAAAACAAGCTGAGGAGGGATGGTGTGATAGCAAAGGAACACTGGAAGATGTCAAAGCAAAGCTACAAATGAGACAAGAAGGAGCCTTCAAAAGAGAGAGAGCAATTGCATATTCTCTTGCTCAGAAGCAATGGAGATCAACCCCTTGTTCAAATTCACGAACAAATGCCTCTCTCAAGAACTTTGACATCGACAAGCCGAGTTACATGAACCTGACTGAGTCAACCAAAGCAAAGCAAAAGGCAAGCAGTGTTGTCACGGTGAATGATTCAACATCTTGTTTTGAGTACTATGCCATAGTCAAGTTTTGGGATCAAACCTCTCTGAACCAAACAGACCTGATCGAGATAAGGAAACTTGTCATGAAGATCACTAGCAGTGGGGATTTGATGAGAACCAGCAAGCAGGTGCTCGTAGACGCCCACTCAACTTCCTGGACTAGAAGACCAAGTATGATGGAGAAGGAACCTGACAAGTCCATTTTAAGTTGGGTGGTGGAGTATATGTCCTCTTTACAAAGCTCTGCATCGGCTATAATTATCAGTGGTTGGACTatttattttgaagaaaaaattAGAGAGAGTGACCCACCACACCAGTCAAACTTAGgagagaagaagaagaagaaacagaaaCAGGGGTTTTGGGTTGTGCTCGTGCGTGCGTGCATGTGGGGGTCTATACGTTGCACATTCACCAGAATGGGGACACACCAACCTATTATGCATAGGCGGGACAAGCTAAGAAGGAAAGAGGTATGA 1284 0.4626 MGASGKWVRALIGLKKPDKDDHPKEGGKTKKWRLWRTSSADMPSWKAFKANHRAASEASDSPLVPDAFTAAMATVVRAPPKDFRLVRQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQMMLNERRTQAELLKQAEEGWCDSKGTLEDVKAKLQMRQEGAFKRERAIAYSLAQKQWRSTPCSNSRTNASLKNFDIDKPSYMNLTESTKAKQKASSVVTVNDSTSCFEYYAIVKFWDQTSLNQTDLIEIRKLVMKITSSGDLMRTSKQVLVDAHSTSWTRRPSMMEKEPDKSILSWVVEYMSSLQSSASAIIISGWTIYFEEKIRESDPPHQSNLGEKKKKKQKQGFWVVLVRACMWGSIRCTFTRMGTHQPIMHRRDKLRRKEV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1020 427 ProSiteProfiles IQ motif profile. 112 139 IPR000048 GO:0005515
Sto5g1020 427 Pfam IQ calmodulin-binding motif 90 109 IPR000048 GO:0005515
Sto5g1020 427 Gene3D - 86 136 - -
Sto5g1020 427 ProSiteProfiles IQ motif profile. 88 116 IPR000048 GO:0005515
Sto5g1020 427 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 230 - -
Sto5g1020 427 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 222 259 - -
Sto5g1020 427 PANTHER IQ-DOMAIN 5-RELATED 222 259 - -
Sto5g1020 427 PANTHER IQ-DOMAIN 5-RELATED 1 230 - -
Sto5g1020 427 SMART iq_5 110 131 IPR000048 GO:0005515
Sto5g1020 427 SMART iq_5 87 109 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1020 Sto-Chr5 6853506 6859340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1020 1 243 IQD Protein Family AT2G26180 71.138 3.00e-101 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1020 - - qsu:112015613 366.696