Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0998 ATGacagataataataataatagtccaAAGCCACCAGATTCAGCACAAGAGAGCCATTTCTCCAATCAAAATCATCCTTTTCAGCTCTCTGATGAGTTCTTTACGTTTGATGATCATCTTGAATGgctagaagatgatgatgatgatcctgACCACTCATTAGTCTCTGGGCAAGTCCCCATTATTAACCAGCTGCAGGTTTATGTAAGCAATGAAGTTAGTGGCTTTGGAGGGAGTACTAGTACTGCCAATTACCCCATTAATATTATTGAGGGGTCCTCTAGCAGAGACATTGGCAGTAGTAGTACTAGTGGTGGGGAGAGGAATCACGTTAGAGAGAGAGTTgcattcaaaacaaagtcagaGATTGAAATACTGAATGATGGGTACAAGTGGAGGAAGTATGGGAAAAAGATGGTGAAGAACAGCCCCAACCCAAGGAATTACTATAGGTGTTCAGTGGAGGGATGCCCAGTGAAAAAGAGAGTTGAGAGAGATAGGGATGATGCAGCGGCCAGCTCTGTTCCATTACACTCTGAAGAAATGctccacacaaaaaaaaatcctcaTTCTGCAATTTGTTGGTCAAGTAAAGCCAATAATGATCCATTTTTAGCATTTCTGAAGAGGGAATCAGTCATGGAAAACACTTGA 654 0.3654 MTDNNNNSPKPPDSAQESHFSNQNHPFQLSDEFFTFDDHLEWLEDDDDDPDHSLVSGQVPIINQLQVYVSNEVSGFGGSTSTANYPINIIEGSSSRDIGSSSTSGGERNHVRERVAFKTKSEIEILNDGYKWRKYGKKMVKNSPNPRNYYRCSVEGCPVKKRVERDRDDAAASSVPLHSEEMLHTKKNPHSAICWSSKANNDPFLAFLKRESVMENT 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0998 217 MobiDBLite consensus disorder prediction 1 24 - -
Sto5g0998 217 ProSiteProfiles WRKY domain profile. 121 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto5g0998 217 Gene3D WRKY domain 113 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto5g0998 217 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 21 170 IPR044810 GO:0003700
Sto5g0998 217 PANTHER WRKY TRANSCRIPTION FACTOR 59-RELATED 21 170 - -
Sto5g0998 217 SMART WRKY_cls 126 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto5g0998 217 SUPERFAMILY WRKY DNA-binding domain 119 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto5g0998 217 Pfam WRKY DNA -binding domain 127 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0998 Sto-Chr5 6729500 6732216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0998 13 169 WRKY Transcription Factor Family AT5G26170 46.386 4.94e-38 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto5g0998 WRKY 8.8e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0998 - - qsu:112019896 146.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0998 5 6729500 6732216 Sto5g0998 5 6729500 6732216 ECH