Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0995 ATGAGTCTAAGAGCTGCTGAGGACGAGTCGGGTTCAGAAATTAATATCCCAGCAGAGATAGATTGGCACATGCTGGACAAATCCAAATTCTTCTTCTTAGGCGCCGCCTTATTTTCCGGTGTATCAACTGCTCTCTATCCTATTGTTGTGTTGAAGACTCGCCAGCAGGTTTGTTCCTCTCAGATTTCTTGCTTCAATATGTCTTTTTCTATTATGCGCTACGAAGGTTTCAGAGGGTTTTACAAAGGTTTTGGAACCTCTTTGACTGGAACCATCCCTGCTCGAGCACTTTACATGGGTGCCCTTGAAGTCACCAAGAGTAATGTTGGTTCTGCCATTGCTGGTTTGGGCTTTTCAGATACCACATCCACCGCCATAGCTAATGCTGCTGCGGGAGTCACTTCTGCTATGGCTGCACAATTAGTGTGGACCCCAATTGATGTTGTGAGCCAAAGACTTATGGTCAGTGGTAGCCACAATATGCTCCCCAATGTTCATTCTGGGAATTACACCAATGGTTTTGATGCCTTCAGGAAAATTCTTTGCACTGATGGACTGCGAGGGTTATACAGAGGATTTGGGATCTCCATATTGACTTATGCACCGTCCAATGCTGTGTGGTGGACTTCTTACTCTGTGGTACATAGGCTCATGTGGGGTGCTTTTGGTGGGATGAGGGATGATGAGAGAAAATTGGCCAATTTAAGACCTGATTCGAAGGCTATGCTAGCTTTCCAAGGGCTAAGCGCAGTTATGGCTAGTGGGGTTTCGGCTCTTGTAACTATGCCGCTGGACACAATCAAGACGAGATTGCAGGTGTTGGATGCAGAGGAAAATGGACGAAGGAGGCCATTGACTGCTATGCAGACTGTTCGGAATTTGGTGAAGGAAGGTGGGTTTGGTGCGTGTTACAGAGGATTGGGGCCAAGGTGGGCTTCAATGTCCATGTCCGCAACAATCATGATTACTACCTACGAGTTTTTGAAACGTATGTCTACCAAGACCCAAGAGAAATTTACTGCATAA 1026 0.462 MSLRAAEDESGSEINIPAEIDWHMLDKSKFFFLGAALFSGVSTALYPIVVLKTRQQVCSSQISCFNMSFSIMRYEGFRGFYKGFGTSLTGTIPARALYMGALEVTKSNVGSAIAGLGFSDTTSTAIANAAAGVTSAMAAQLVWTPIDVVSQRLMVSGSHNMLPNVHSGNYTNGFDAFRKILCTDGLRGLYRGFGISILTYAPSNAVWWTSYSVVHRLMWGAFGGMRDDERKLANLRPDSKAMLAFQGLSAVMASGVSALVTMPLDTIKTRLQVLDAEENGRRRPLTAMQTVRNLVKEGGFGACYRGLGPRWASMSMSATIMITTYEFLKRMSTKTQEKFTA 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0995 341 Pfam Mitochondrial carrier protein 36 108 IPR018108 -
Sto5g0995 341 Pfam Mitochondrial carrier protein 248 334 IPR018108 -
Sto5g0995 341 Pfam Mitochondrial carrier protein 124 219 IPR018108 -
Sto5g0995 341 Gene3D Mitochondrial carrier domain 30 340 IPR023395 -
Sto5g0995 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 217 IPR018108 -
Sto5g0995 341 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 338 - -
Sto5g0995 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 241 331 IPR018108 -
Sto5g0995 341 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 338 - -
Sto5g0995 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Sto5g0995 341 SUPERFAMILY Mitochondrial carrier 23 328 IPR023395 -
Sto5g0995 341 PRINTS Mitochondrial carrier protein signature 43 57 IPR002067 GO:0055085
Sto5g0995 341 PRINTS Mitochondrial carrier protein signature 190 208 IPR002067 GO:0055085
Sto5g0995 341 PRINTS Mitochondrial carrier protein signature 250 272 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0995 Sto-Chr5 6715048 6716073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0995 1 339 Chloroplast and Mitochondria Gene Families AT1G72820 66.282 4.13e-161 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0995 K15121 - gmx:100784202 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0995 5 6715048 6716073 Sto5g0995 5 6715048 6716073 ECH