Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0994 ATGGCGGATCCCCAGTCTATTGTTCCTTATCACGATCCTTACGATATCCCACTTCCCCAAAACATTCTTAATTTCGGGAATGAACATAATCCCACTCTTGCTGATTTATCCAATGACCCCTACACTTCTTCAATCCCCCCTCCAAATCATCCAATCTTTATGCAGGGTAGTGGTACTGATAATGCTCCGTATTCGAGCCCAATGATTCAAGATGCGGCGGTTCATAATTTTTTGCATCAAGGAGCCAACTTCGAACCCGGTCCATCATCATCCCAATCCCAATTCCATGGGGAAAGTCATCCGGGTCAACAACATATGGGTTCACAGAACTTCACTGAATCAGTTCAACTTTCATACTGGCCAGAACCACCCGTTCCTTTTATTTGCAGTTGCTGCCAAGTGCTGCGAGAAATTGTTCATACCAATGggaTTGTGTTTACAAAACTGGAGATCCACGGAAGGCTTGGAATGATTTGCCATGCAATTCAACAAAAGAACATCAATGCGGCTTCTTCTGGGGATAATCAGATTCAAATGTTTGATTTTTGCAGCAGGAGCATAGTGGAAGTAAAGACTTTTCTGATGCAATATTGCTTGGAGCAAAATGCAGCAGGCTACTTCGTTCTGCAAGATCCTTTTTCTCCATTTTATGAAGCACTCTGCATTGGCATGGACTGGACTGAGGATATAAAAGATGAATTGGTTGACATGAACTTAGACAATTCTGGGGGAATATCTGATGAGGCAGAGGATATGGATAGGACTCTTAGGACTTGCCTTGCATTACAGagagagagagcagggAAGATGAAACTGAGTGATTTCAGCGACTACTTTCATTTACCAATAGAAGATGCAGCGAAGGAAGTGAACTTATGCCCCACAGTGGTCAAGAAAATATGCCGTAAAGAAGGATTAGCCAGATGGCCGCATAGAAAGATAAAGAGCAtcgtaaagaaaataaatatactgAGAGGGACATTAAACTCGGACGATGCAAGGTCAAGGGCACAAACTGAAGCAGAAATTAACAGACTTGTGCAAGAAATGATTCAGCACTGTGGTGGAATCGCTCCAACTTCTTTAAATTTCGATACATATTCTTGA 1107 0.4092 MADPQSIVPYHDPYDIPLPQNILNFGNEHNPTLADLSNDPYTSSIPPPNHPIFMQGSGTDNAPYSSPMIQDAAVHNFLHQGANFEPGPSSSQSQFHGESHPGQQHMGSQNFTESVQLSYWPEPPVPFICSCCQVLREIVHTNGIVFTKLEIHGRLGMICHAIQQKNINAASSGDNQIQMFDFCSRSIVEVKTFLMQYCLEQNAAGYFVLQDPFSPFYEALCIGMDWTEDIKDELVDMNLDNSGGISDEAEDMDRTLRTCLALQRERAGKMKLSDFSDYFHLPIEDAAKEVNLCPTVVKKICRKEGLARWPHRKIKSIVKKINILRGTLNSDDARSRAQTEAEINRLVQEMIQHCGGIAPTSLNFDTYS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0994 368 MobiDBLite consensus disorder prediction 80 108 - -
Sto5g0994 368 MobiDBLite consensus disorder prediction 83 108 - -
Sto5g0994 368 Pfam RWP-RK domain 270 317 IPR003035 -
Sto5g0994 368 ProSiteProfiles RWP-RK domain profile. 257 337 IPR003035 -
Sto5g0994 368 PANTHER PROTEIN RKD4 3 356 IPR044607 GO:0003700
Sto5g0994 368 PANTHER RWP-RK DOMAIN PROTEIN 3 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0994 Sto-Chr5 6712257 6713798 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0994 269 354 AtRKD Transcription Factor Family AT5G53040 35.106 3.32e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Sto5g0994 RWP-RK 9.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0994 - - lang:109354161 362.844