Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0991 ATGTTGGAAGAGAATAACAATCACAATTCCACCTTGAAAGAACATTTCGTCattaattcacctaataaatcCAACGCTGTTAATAGGACAGCGTCCATCACTCCTAAGACGCCTTTGATGGCGTCTCCGGGACCAGCTGGagaggatgaggatgaggatgaaaTCATTTTCAAAAAAGTTGAATTGAGTAAAGGGAAGCGTAAGACAGCCACATATAAGGTTTTGATTGAATGGGTTGTGTCTGTGTGCATTACGGGGTGCCTGGTGGTTAGCTTGACAGTTGAAAGATTGAAAAACCtaatgatttggggtttggaattttgGAAGTGGTGTGTGCTTGTGATGGTTATCTTCTGTGGCTTGTTAGTTACCAAATGGTTCATGCACTTCGTTGTTTTCTTGATTGAAATGAACTTTTTGCTGAGGAGAAGGGTTCTGTATTTTGTTCATGGACTAAAGAAAAGTGTTCAGGCCTTCATTTGGCTGGGTTTGGTTCTTTTCACATGGGTTCTATTGATCAATCGTGGTGTTCAGCGGTCTGAACTTGCCTCAAAAGTTTTGAATGGTGTGACATGGACTCTTGTTTCTCTTCTCATTGGGGCCTTCTTATGGTTGTTGAAGACGTTACTGCTAAAAATATTAGCCACAAATTTTCATGTCAAGTCTTTCTTTGATAGAATTCAAGAATCAATCTTCCATCAATATGTTCTGCAGATTCTCTCTGGGCCTCCATTAATAGAGGAGGCTGAGAAGGCTGGTAGATCACGTAGTGTTGGCCGATTTAGTTTCAGAAGTACAAAAGGTAAAAAAGGCACAAAGAAAGAGATTATTGACATGGCAAAGCTTCAAAAGATGAAACAAGAGAAAGTTTCTGCTTGGACAATGAAGATTTTAGTTGACGCAGTGATAAATTCAAGGCTATCCACAATCTCTAATGTGCTAGAAGAAAGTTTTGACGACGGAGGACTGGAGCAAACTGATAAAGAGATCAAAAATGAGATGGAAGCAACTGCTGCTGCCTATCACATTTTCAGGAATGTTGCTGCCCCTGGTTGCTCgtACATTGATGAAGATGACCTCCTGAGGTTCATGATTAAGGAAGAACTGGATCTGGTGTTTCCACTCTTCGAAGGATCAGAGACTGGACGGATTGACAGAAAGGGTTTAACAAACTGGGTGGTGAAGGTCTATAAGGAACGCAAAATATTAGGACACGCCTTAAGTGACGCCAAGACAGCAGTAAAACAATTGAACAAGCTTGTGACAGGGATCCTGGTAATTTTGACCATAATTGTGTGGCTTCTACTGATGGAGATTGCAACAACAAAAGTACTTGTGTTTCTCTCATCACAGCTAGTACTTGCAACCTTCATGTTTGGAAACACatgcaaaaatatatttgaagcTATCATATTTGTGTTTGTAATGCATCCATTTGATGTTGGTGATCGATGTGTTGTTGATGGGGTTCAGCTGTTGGTTGAAgaaatgaatattttgacaACTGTATTCTTGAAGCTTGATAATGAGAAGGTGTACTATCCAAACTCGGTTCTGGCCACGAAACCTATTAGCAATTATTACCGAAGCCCGGATATGGGTGACTCTATAGAGTTTGCTATTGACTTTATGACACCAGTGGAGAGGATTGGAgcattgaaagaaaaaataaagagGTACTTGGAGAACAATCCACAACACTGGCATCCTAATCACAACGTGGTAGTGAAGGAGATTGAAAATGTGAATAAGATTAAAATAGGTCTCTATGTTAACCACACAATGAACTTTCAAGAATTTGGGGAGAAGAACAAACGGAGAACTGAACTAATGATGGAACTAAAGAAAATATTTGAAGAGCTAAATATCAGATACAATCTTCTTCCTCAGGCAGTTCATCTCAGCCATGTGGAATCTGATACCAGCGTACTCAAGAGGTAA 1941 0.3787 MLEENNNHNSTLKEHFVINSPNKSNAVNRTASITPKTPLMASPGPAGEDEDEDEIIFKKVELSKGKRKTATYKVLIEWVVSVCITGCLVVSLTVERLKNLMIWGLEFWKWCVLVMVIFCGLLVTKWFMHFVVFLIEMNFLLRRRVLYFVHGLKKSVQAFIWLGLVLFTWVLLINRGVQRSELASKVLNGVTWTLVSLLIGAFLWLLKTLLLKILATNFHVKSFFDRIQESIFHQYVLQILSGPPLIEEAEKAGRSRSVGRFSFRSTKGKKGTKKEIIDMAKLQKMKQEKVSAWTMKILVDAVINSRLSTISNVLEESFDDGGLEQTDKEIKNEMEATAAAYHIFRNVAAPGCSYIDEDDLLRFMIKEELDLVFPLFEGSETGRIDRKGLTNWVVKVYKERKILGHALSDAKTAVKQLNKLVTGILVILTIIVWLLLMEIATTKVLVFLSSQLVLATFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVVDGVQLLVEEMNILTTVFLKLDNEKVYYPNSVLATKPISNYYRSPDMGDSIEFAIDFMTPVERIGALKEKIKRYLENNPQHWHPNHNVVVKEIENVNKIKIGLYVNHTMNFQEFGEKNKRRTELMMELKKIFEELNIRYNLLPQAVHLSHVESDTSVLKR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0991 646 PIRSF Memb_At2g17000 3 645 IPR016688 -
Sto5g0991 646 SUPERFAMILY Sm-like ribonucleoproteins 468 527 IPR010920 -
Sto5g0991 646 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 20 639 IPR016688 -
Sto5g0991 646 Pfam Mechanosensitive ion channel 419 624 IPR006685 GO:0016020|GO:0055085
Sto5g0991 646 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 20 639 - -
Sto5g0991 646 Gene3D - 478 527 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0991 Sto-Chr5 6686197 6688697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0991 16 635 Mechanosensitive Ion Channel Family AT5G12080 62.761 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0991 K22048 - gmx:100803107 946.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0991 5 6686197 6688697 Sto5g0991 5 6686197 6688697 ECH
Sto5g0991 5 6686197 6688697 Sto9g3411 9 33750272 33752954 ECH