Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0986 ATGGGGAAGAGTCCACGTTGGTCGAAGGAAGGACTGAACAGAGGAGCCTGGAGTCCCCATGAGGACAAGTTACTCACTTCTTACATTGAGACCCATGGCCTAGGCAAATGGAGTCACGTCCCCAAAAGAGCTGgCTTGAACAGATGTGGCAAAAGCTGTAGGCTCCGATGGTTGAACTATCTCAGGCCTAACATTAAGCGAGGCAACATCACCCTCGATGAAGAAGAACTCATTATTAGGCTCCATAACCTTCTTGGTAACAGATGGTCACTCATAGCTGGAAGGCTACCAGAGCGAACAGACAACGAAATTAAAAACTACTGGAACACTACTCTAGCAAAGAAGCTTAGAATTCAGTCTTCGTCTCAGTCACAAATAATCCAGACCAAGGCCAGTAGGTGCAAGAATGTGGTCATCCTACAACCCCCATATCCTAATAATAATTACCAAAATTCCAACATCGACCGTGATATGTCCCTTGCTTCAAACCACTCTACAAAAGCTCAACTCGAGGATGAAATCTGTGGGAAGAACCAGTTGTTTGCGTTTAACCATGAGAGCAGCATGGGAGGAAAAGGTGGTGAGCATTTGGGGGCTATTGATGAGCAAGTTATGGTGAATGAGTGGAGCAATACTCCAAGTGGGTTCGAGGTGGACGACGACAATCAAGCTGTGGATTTTGATTCATTGGCTCTTCTTCTGCTTGATTCCGGGGATTGGCCTTGA 726 0.4614 MGKSPRWSKEGLNRGAWSPHEDKLLTSYIETHGLGKWSHVPKRAGLNRCGKSCRLRWLNYLRPNIKRGNITLDEEELIIRLHNLLGNRWSLIAGRLPERTDNEIKNYWNTTLAKKLRIQSSSQSQIIQTKASRCKNVVILQPPYPNNNYQNSNIDRDMSLASNHSTKAQLEDEICGKNQLFAFNHESSMGGKGGEHLGAIDEQVMVNEWSNTPSGFEVDDDNQAVDFDSLALLLLDSGDWP 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0986 241 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Sto5g0986 241 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sto5g0986 241 PANTHER TRANSCRIPTION FACTOR TT2 1 188 - -
Sto5g0986 241 CDD SANT 16 61 IPR001005 -
Sto5g0986 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Sto5g0986 241 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sto5g0986 241 SMART sant 13 63 IPR001005 -
Sto5g0986 241 SMART sant 66 114 IPR001005 -
Sto5g0986 241 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 188 - -
Sto5g0986 241 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Sto5g0986 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Sto5g0986 241 Gene3D - 70 138 - -
Sto5g0986 241 CDD SANT 71 112 IPR001005 -
Sto5g0986 241 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Sto5g0986 241 Gene3D - 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0986 Sto-Chr5 6660448 6661374 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0986 1 116 MYB Transcription Factor Family AT2G16720 67.241 1.24e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto5g0986 Myb_DNA-binding 1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0986 K09422 - tcc:18588141 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0986 5 6660448 6661374 Sto5g0986 5 6660448 6661374 ECH