Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0983 ATGGAGGACAATTTGCTCACCTCTTACGTTAAGGCCCACGGCCAAGGCAAATGGAGATCCCTCCCTAAAAGAGCTGggTTGAAAAGATGTGGCAAAAGCTGTAGGCTTAGATGGTTGAACTATCTGAGGCCTGACATTAAGCGAGGTAATATTACCCACGATGAAGAAGACCTTATTATTAGGCTTCATAAACTTCTGGGTAACAGATGGTCTCTCATCGCGGGAAGACTACCTGGGCGAACAGACAATGAAATCAAAAACTACTGGAACACCACTCTCATCAAGAAGTTTACTCAACCTCAACTCATTCAAACAAAGGCCACTAAGTGCAAAAACCTCCTCATCTTACCACCTCCATCCCCATCTCCTAATTACCAAAAccacaatattaataataatatgaatatCCAATTACATCATCATCACTACTACTTGCCAAATCAATCTCAGGCCAAACCTCGAGTCAATGAAGATGGATCAGATCACGAAAACCACAATAATATTTGGCAAGTGAATTCGTTTGAGGTAAATAATGCAGCAGATTTTTGCACAGACTTAATTAACCTTGACTCCACCATGGAACCTCATGCTCAACTCGTGCTAGATGGATGGGCCACGTCACCCATAAATGCCTTCCAAAATGCCACTATGGATTTCGACTCACTCGCCCTTTTGCTCCATTCTGAGGATTGGCCATGA 699 0.4177 MEDNLLTSYVKAHGQGKWRSLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITHDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTTLIKKFTQPQLIQTKATKCKNLLILPPPSPSPNYQNHNINNNMNIQLHHHHYYLPNQSQAKPRVNEDGSDHENHNNIWQVNSFEVNNAADFCTDLINLDSTMEPHAQLVLDGWATSPINAFQNATMDFDSLALLLHSEDWP 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0983 232 Gene3D - 51 113 - -
Sto5g0983 232 ProSiteProfiles Myb-like domain profile. 1 42 IPR001005 -
Sto5g0983 232 PANTHER MYB-RELATED PROTEIN MYB4 1 159 - -
Sto5g0983 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 97 IPR017930 -
Sto5g0983 232 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 159 - -
Sto5g0983 232 CDD SANT 52 93 IPR001005 -
Sto5g0983 232 Gene3D - 1 47 - -
Sto5g0983 232 Pfam Myb-like DNA-binding domain 48 92 IPR001005 -
Sto5g0983 232 Pfam Myb-like DNA-binding domain 2 42 IPR001005 -
Sto5g0983 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 42 IPR017930 -
Sto5g0983 232 CDD SANT 2 42 IPR001005 -
Sto5g0983 232 ProSiteProfiles Myb-like domain profile. 43 93 IPR001005 -
Sto5g0983 232 SUPERFAMILY Homeodomain-like 2 89 IPR009057 -
Sto5g0983 232 SMART sant 47 95 IPR001005 -
Sto5g0983 232 SMART sant 1 44 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0983 Sto-Chr5 6640734 6641626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0983 2 97 MYB Transcription Factor Family AT3G13540 78.125 1.59e-52 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto5g0983 Myb_DNA-binding 1.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0983 K09422 - pvy:116141298 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0983 5 6640734 6641626 Sto5g0983 5 6640734 6641626 ECH