Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0975 ATGGCGGCTCATCTACTCagattttctctctctcctcaaCCTGAGCTCTGCTTCGTTGACAGAAGAAACCGTGATGTCCACGGCGTTGACTTCATTTCTAGACTTCCGGTAGAACGAGGTCGAAGCTTCAGACGCTGGTGCGTTCTCCGCCCACATTCTGGCCGAAATTTTGTCATATCAAGCGCCCTTGAAACTAGAATTGACTCAGCCGAAGGAGCCCTTGAAGGCCAGGGGCAGAGCAAAAATTCGCCTGTTTTACTTGATGTTACTGGAATGATGTGTGGAGCTTGCGTTTCCCGAGTCAAAAACATCTTGTCCGCCGATGAGCGAGTCGAATCGGTTGTTGTCAACATGTTGACTGAGACTGCTGCGATTAAGTTGAAGAAATTGGAGGAGGCACCTGCCAATGTAGCCGAGAGCCTCGCTAGGAGACTGAGTGAATGCGGTTTTCCAACAAAACGGAGGGTTTCGGATATGGGAGTGACGGAAAATGTGAAGAAATGGAAGGATTTGGTGAGGAAGAAGGAAGAACTGCTTGTCAAGAGTCGGAATCGTGTTGCCTTTGCTTGGACTTTGGTAGCATTGTGCTGTGGATCGCATGCATCGCACATTCTTCATTCTTTAGGAATCCACATTACTCAcgGACCCCTATGGGAAGGTCTTCATAATTCATATGTGAAGGGTGTTTTAGCTTTGGGGGCTCTATTGGGACCAGGAAGAGATTTACTGTTCGATGGCCTAAGGGCTTTTAAGAAGGGATCACCAAATATGAACTCTCTTGTGGGTTTTGGTTCTATGGCTGCCTTTATCATCAGTTCAATCTCACTACTTAACCCTGGGATGGCATGGGATGCATCATTCTTTGATGAGCCGGTCATGCTTCTTGGTTTTGTGCTTCTAGGACGTTCACTGGAAGAAAAGGCAAGGATTCAGGCTTCTAGTGATATGAATGAACTTCTTTCACTGATATCCACTCGATCAAGACTTGTGATTACTTCCTCAGATAGTGCTCCATCTACAACCAGTGTGCTTTGCTCCGATGCAATTTGTGTTGAAGTCCCGACTGACAATATTCGAGTAGGTGACTCAGTGTTGGTGTTGCCTGGAGAAACTATTCCTATAGATGGAAAGGTCATTTCGGGAAGAAGTGTTGTGGATGAATCCATGCTCACAGGAGAATCACTTCCTGTGTTTAAAGAAGAAGGCCTTGCAGTTTCTGCAGGAACTATAAATTGGGATGGTCCTTTAAAGATTGAAGCTACTTCTACTGGCTCCAACACAATGATATCCAAAATTGTCCGCATGGTTGAGGATGCTCAATCGCGTGAAGCTCCTGTACAAAGGCTCGCAGATTCAATAGCTGGTCCATTTGTGTACAGTGTACTGACTCTATCAGCAGCAACATTTGCATTTTGGTATTTCATTGGATCACATGCTTTTCCAGATGTTTTACTCAATGATATTGCAGGCCCAGAAGGAGATCCTTTGCTTTTGAGCTTGAAACTTGCTGTAGATGTCTTGGTTGTGTCTTGCCCTTGTGCACTGGGCCTTGCCACACCCACAGCAATCCTAGTTGGCACTTCACTTGGGGCAAGAAAAGGACTTCTCATTAGAGGAGGAGATGTGCTGGAACGCTTAGCTAGCATAAATTATGTTGCCCTGGACAAGACAGGAACCATCACAAGAGGAAAACCAGTTGTCTCTGCTGTTTGCTCTTTCGATTATGGAGAATCAGAAATTCTTCGGCTTGCTGCTGCAGTGGAGAAAACAGCATCTCATCCACTGGCTAAGGCTATTATCAATAAAGCTGAGTCGTTAGAATTGGTCCTTCCGGTCACGAAAGGGCAATTAGTTGAACCGGGTTTTGGAACCTTGGCGAAAATAGATGGCCGTTTGGTTGCGGTCGGTTCTTTAGAATGGGTACATGAGCGCTTCCAAACAAGAATGAACTCATCTGATCTGATGAATCTGGAACATGTTTTGATGAATCAATTATCAAAGGATGTTCCCTCAAACTATTCAAAAACTGTTGTTTACATTGGACGTGAAGGAGAAGGCATCATTGGTGCTATTGCCTTCTCTGACATTTTGCGTGATGATGCTGGATCTACTGTGATGAGACTCCAGCAGAAGGGTATTAAAACAGTCATCTTATCCGGGGACAGGGAAGAGGCAGTTGCAACTATAGCCAATACCGTTGGGATAGAAAGTAGTTTAGTCAAGGCATCATTGTCTCCACAACAGAAATCTACATTTATTTCATCTCTTAAAGCTGCTGGGCATCGTGTTGCAATGGTAGGTGATGGGATAAATGATGCGCCCTCTTTGGCTGTAGCTGATGTTGGGATTGCTCTGCAGAATGAAGCTCAGGAGAATGCTGCATCAGATGCAGCATCCATCATACTTGTTGGGAATAATATTTCACAGGTTGTGGATGCCCTAGACCTTGCACGAGCAACCATGGCAAAAGTGTACCAGAATTTGTCGTGGGCTGTAGCTTATAATGTTGTAGCCATACCCATTGCAGCTGGTGCGTTACTTCCCCAATTTGATTTTGCTATGACACCTTCACTTTCAGGAGGATTAATGGCATTGAGCTCCATCTTCGTGGTCGGCAATTCTTTGCTTTTAAAGCTTCATGAGTATAAGACAACCAGTAGGAGCTAG 2667 0.4469 MAAHLLRFSLSPQPELCFVDRRNRDVHGVDFISRLPVERGRSFRRWCVLRPHSGRNFVISSALETRIDSAEGALEGQGQSKNSPVLLDVTGMMCGACVSRVKNILSADERVESVVVNMLTETAAIKLKKLEEAPANVAESLARRLSECGFPTKRRVSDMGVTENVKKWKDLVRKKEELLVKSRNRVAFAWTLVALCCGSHASHILHSLGIHITHGPLWEGLHNSYVKGVLALGALLGPGRDLLFDGLRAFKKGSPNMNSLVGFGSMAAFIISSISLLNPGMAWDASFFDEPVMLLGFVLLGRSLEEKARIQASSDMNELLSLISTRSRLVITSSDSAPSTTSVLCSDAICVEVPTDNIRVGDSVLVLPGETIPIDGKVISGRSVVDESMLTGESLPVFKEEGLAVSAGTINWDGPLKIEATSTGSNTMISKIVRMVEDAQSREAPVQRLADSIAGPFVYSVLTLSAATFAFWYFIGSHAFPDVLLNDIAGPEGDPLLLSLKLAVDVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLASINYVALDKTGTITRGKPVVSAVCSFDYGESEILRLAAAVEKTASHPLAKAIINKAESLELVLPVTKGQLVEPGFGTLAKIDGRLVAVGSLEWVHERFQTRMNSSDLMNLEHVLMNQLSKDVPSNYSKTVVYIGREGEGIIGAIAFSDILRDDAGSTVMRLQQKGIKTVILSGDREEAVATIANTVGIESSLVKASLSPQQKSTFISSLKAAGHRVAMVGDGINDAPSLAVADVGIALQNEAQENAASDAASIILVGNNISQVVDALDLARATMAKVYQNLSWAVAYNVVAIPIAAGALLPQFDFAMTPSLSGGLMALSSIFVVGNSLLLKLHEYKTTSRS 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0975 888 SUPERFAMILY Calcium ATPase, transduction domain A 344 436 IPR008250 -
Sto5g0975 888 Pfam E1-E2 ATPase 337 533 - -
Sto5g0975 888 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 555 648 IPR023299 GO:0000166
Sto5g0975 888 SFLD p-type atpase 536 820 IPR044492 -
Sto5g0975 888 Gene3D - 77 156 - -
Sto5g0975 888 ProSitePatterns E1-E2 ATPases phosphorylation site. 555 561 IPR018303 -
Sto5g0975 888 Gene3D - 564 697 IPR023299 GO:0000166
Sto5g0975 888 PANTHER ATP7, ISOFORM B 81 879 - -
Sto5g0975 888 CDD HMA 87 151 IPR006121 GO:0046872
Sto5g0975 888 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 335 858 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto5g0975 888 Pfam Heavy-metal-associated domain 87 150 IPR006121 GO:0046872
Sto5g0975 888 CDD P-type_ATPase_HM 185 876 - -
Sto5g0975 888 Gene3D - 309 440 - -
Sto5g0975 888 Gene3D - 544 818 IPR023214 -
Sto5g0975 888 SUPERFAMILY HMA, heavy metal-associated domain 84 135 IPR036163 GO:0046872
Sto5g0975 888 SUPERFAMILY Calcium ATPase, transmembrane domain M 287 856 IPR023298 -
Sto5g0975 888 SFLD C1.7: P-type atpase like 536 820 - -
Sto5g0975 888 SUPERFAMILY HAD-like 552 874 IPR036412 -
Sto5g0975 888 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 257 877 IPR027256 GO:0006812|GO:0016021|GO:0019829
Sto5g0975 888 ProSiteProfiles Heavy-metal-associated domain profile. 84 154 IPR006121 GO:0046872
Sto5g0975 888 Pfam haloacid dehalogenase-like hydrolase 549 780 - -
Sto5g0975 888 PRINTS P-type cation-transporting ATPase superfamily signature 386 400 - -
Sto5g0975 888 PRINTS P-type cation-transporting ATPase superfamily signature 553 567 - -
Sto5g0975 888 PRINTS P-type cation-transporting ATPase superfamily signature 711 721 - -
Sto5g0975 888 PRINTS P-type cation-transporting ATPase superfamily signature 766 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0975 Sto-Chr5 6568025 6576780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0975 226 881 Primary Pumps ATPases AT1G63440 36.148 3.18e-115 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0975 K17686 - gmx:100127402 1370.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0975 5 6568025 6576780 Sto5g0975 5 6568025 6576780 ECH