Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0974 ATGGCATTCCGGTCTGGACTTGTTCTTCTGGCTTTCGTCATTTGTTTGAATATCATTTCCGCGGATTCGGAAGATGGAGCTACATTACTGGAGATAAAGAAGTCGTTCAGAGATGTGGATAATGTTCTATACGACTGGACAGACTCTCCATCTTCTGATTACTGCGTCTGGAGAGGGGTCACTTGCGATAATGTCACCTTCGATGTCATTGCACTCAACctttcaagtttaaatcttgACGGCGAAATCTCAACTGCAATAGGAAACCTCAAGAGCTTGGTCTCTATTGACCTTAGGGGAAACCGTCTTTCAGGCCAGATACCAGATGAGATCGGTGACTGTTCTTCATTGAAGAGCTTGGATCTGTCATTTAATGAGATACGAGGAGATATACCATTTTCGATTTCGAAGTTGAAACAACTGGAGTATCTaTTTTTGAAAAACAACCAGTTAATAGGACCAATCCCTTCAACCTTGTCTCAGATACCCAACTTGAAGATTCTAGACCTGGCACAAAACAATCTTAGCGGTGAAATACCAAGGCTTATATACTGGAACGAAGTTCTGCAGTATCTTGGCTTGCGAGGGAACAGTTTAGTGGGTTCGCTCTCTCCAGACATGTGTCAATTAACGGGATTATGGTATTTTGATGTAAGGAACAACAGCTTGACAGGCAGCATTCCTGAAAGTATAGGCAACTGTACTGCCTTCCAGGTCTTGGATTTATCATACAACCGGTTGACTGGAAAGATTCCATTCAATATTGGATTTCTTCAAGTAGCAACATTGTCATTGCAAGGCAATCAACTCTCTGGGCATATTCCATCAGTGATCGGGTTGATGCAAGCACTTGCTGTATTAGATTTAAGTTGTAACATGTTAAGTGGATCGATCCCTCCTATCTTGGGAAATCTTACATATACAGAAAAATTGTACTTGCATGGAAATAAGTTGACTGGTCCGATCCCCCCAGAGCTTGGAAATATGACAAAGCTTCACTATTTGGAACTGAATGATAACCATTTAAGTGGATATATCCCACCTGAGCTTGGAAAGCTTACTGATTTGTTTGACTTAAATGTTGCTAACAACAACCTTGAGGGGCCAATTCCTGATAATATTAGCTCATGCAAAAATCTCAACAGCCTCAATGTGCATggaaacaaattaaatggaACAATCCCCTCAGCTTTTCAGAGCTTGGAGAGTATGACGTATCTGAATCTTTCCTTCAACAATCTTCAAGGATCCATTCCAATTGAGCTGTCACGAATTGGTAACTTGGATACATTGGatatttctaataataatataagtggATCCATTCCTTCTCCCCTTGGTGACTTGGAACATCTTCTGAAGCTgaATCTGAGCAGAAATCATCTAAATGGGTTTATTCCAGCAGAGTTTGGTAATTTAAGAAGTATTATGGATATAGATCTTTCAAATAATCAACTCTCTGGTTTGATTCCTGAAGAACTTAGTCAGCTTCAGAATATGATATCCCTGAGACTGGAAAACAACAAACTATCCGGGGATGTGACCTCACTTACAAATTGCCTCAGTCTTTCTTTCCTTAATGTATCCTATAACAACCTAGTTGGTGTTATTCCCACTAGCAATAACTTCTCAAGGTTTTCCCCTGACAGTTTTATTGGAAACCCTGGTCTTTGTGGCTATTGGATGACTATGCCTTGTCATGGATCTCATTCTACAGAGCGAGTCACGTTATCTAAGGCAGCTATCCTAGGAATTGCGCTTGGTGCCCTTGTGATTCTTCTTATGATATTACTAGCTGCTTGTCGGCCGTACAATCCATCTCCATTTCCTGATGGATCACTTGACAAACCAGTTAATAATTCACCCCCAAAGCTAGTGATTCTTCATATGAATATGGCTCTTCATGTGTATGAGGATATCATGAGGATGACAGAAAACTTGAGTGAGAAGTATATGATTGGATATGGTGCATCAAGCACAGTGTATAAATGTGTTCTGAAGAATTGCAAGCCAGTTGCCATCAAGAAGCTCTATTCTCACTACCCTCAATGCTTAAAAGAATTTGAGACAGAACTTGAGACGGTTGGTAGGATCAAGCACCGGAATCTGGTTAGTCTTCTATGGGATCTTCTTCATGGAgcatccaaaaagaaaaagctaGATTGGGATCTTCGCTTAAAAATAGCGGTTGGAGCAGCCCAAGGGCTTGCCTATCTACACCATGATTGTTGTCCCCGTATCATCCACAGGGATGTGAAGTCATCAAATATACTGCTGGACAAGGACTTTGAGGCTCATCTCACTGATTTTGGTATTGCTAAAAGCCTATGCCCTTCAAAGTCCCACACTTCAACTTACATAATGGGCACAATCGGTTACATAGACCCTGAGTATGCTCGAACTTCCCGCCTCACGGAAAAGTCCGATGTCTATAGCTACGGTATTGTTTTGCTTGAGTTGCTCACTGGTCGGAAAGCTGTTGACAATGAATCCAATCTCCATCACCTGATTTTGTCAAAGACAGCGAACAATGCAGTGATGGAGACAGTTGATCCTGATATTACCGCCTCATGCAAGGACCTTGGAGCAGTAAAGAAGGTATTTCAGCTTGCTCTCTTGTGCACAAAGAGACAGCCAGTTGATAGGCCAACAATGCACGAGGTGACACGTGTCCTAGGAAGCCTTGTGCCACCTCTGTCCCCACCAAAACAAACTGCCCCACCAGCCCCGGCCTCTGCCTTGCTTCCATCTGCGAAGGCGCCATCTTGCTACATGGACGAGTATGCAAATCTGAAGGCTCCTCACTTGGTGAATTGCCCCTCAATGAGCACCTCTGATGCCCAGCTCTTCCTCAAATTTGGAGAGGTAATTTCCCAGAACAGTGAGTGA 2889 0.4164 MAFRSGLVLLAFVICLNIISADSEDGATLLEIKKSFRDVDNVLYDWTDSPSSDYCVWRGVTCDNVTFDVIALNLSSLNLDGEISTAIGNLKSLVSIDLRGNRLSGQIPDEIGDCSSLKSLDLSFNEIRGDIPFSISKLKQLEYLFLKNNQLIGPIPSTLSQIPNLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNSLVGSLSPDMCQLTGLWYFDVRNNSLTGSIPESIGNCTAFQVLDLSYNRLTGKIPFNIGFLQVATLSLQGNQLSGHIPSVIGLMQALAVLDLSCNMLSGSIPPILGNLTYTEKLYLHGNKLTGPIPPELGNMTKLHYLELNDNHLSGYIPPELGKLTDLFDLNVANNNLEGPIPDNISSCKNLNSLNVHGNKLNGTIPSAFQSLESMTYLNLSFNNLQGSIPIELSRIGNLDTLDISNNNISGSIPSPLGDLEHLLKLNLSRNHLNGFIPAEFGNLRSIMDIDLSNNQLSGLIPEELSQLQNMISLRLENNKLSGDVTSLTNCLSLSFLNVSYNNLVGVIPTSNNFSRFSPDSFIGNPGLCGYWMTMPCHGSHSTERVTLSKAAILGIALGALVILLMILLAACRPYNPSPFPDGSLDKPVNNSPPKLVILHMNMALHVYEDIMRMTENLSEKYMIGYGASSTVYKCVLKNCKPVAIKKLYSHYPQCLKEFETELETVGRIKHRNLVSLLWDLLHGASKKKKLDWDLRLKIAVGAAQGLAYLHHDCCPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTANNAVMETVDPDITASCKDLGAVKKVFQLALLCTKRQPVDRPTMHEVTRVLGSLVPPLSPPKQTAPPAPASALLPSAKAPSCYMDEYANLKAPHLVNCPSMSTSDAQLFLKFGEVISQNSE 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0974 962 SUPERFAMILY L domain-like 25 258 - -
Sto5g0974 962 Pfam Protein kinase domain 716 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0974 962 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 6 949 - -
Sto5g0974 962 Gene3D Transferase(Phosphotransferase) domain 1 710 898 - -
Sto5g0974 962 ProSiteProfiles Leucine-rich repeat profile. 164 186 IPR001611 GO:0005515
Sto5g0974 962 Gene3D Ribonuclease Inhibitor 22 187 IPR032675 -
Sto5g0974 962 Gene3D Ribonuclease Inhibitor 188 276 IPR032675 -
Sto5g0974 962 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Sto5g0974 962 Pfam Leucine rich repeat 379 438 IPR001611 GO:0005515
Sto5g0974 962 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Sto5g0974 962 ProSiteProfiles Protein kinase domain profile. 647 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0974 962 SUPERFAMILY Protein kinase-like (PK-like) 625 892 IPR011009 -
Sto5g0974 962 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 949 - -
Sto5g0974 962 ProSitePatterns Protein kinases ATP-binding region signature. 653 676 IPR017441 GO:0005524
Sto5g0974 962 ProSiteProfiles Leucine-rich repeat profile. 427 450 IPR001611 GO:0005515
Sto5g0974 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 747 759 IPR008271 GO:0004672|GO:0006468
Sto5g0974 962 Gene3D Ribonuclease Inhibitor 281 569 IPR032675 -
Sto5g0974 962 ProSiteProfiles Leucine-rich repeat profile. 116 139 IPR001611 GO:0005515
Sto5g0974 962 SMART LRR_typ_2 473 496 IPR003591 -
Sto5g0974 962 SMART LRR_typ_2 281 305 IPR003591 -
Sto5g0974 962 SMART LRR_typ_2 90 114 IPR003591 -
Sto5g0974 962 SMART LRR_typ_2 449 472 IPR003591 -
Sto5g0974 962 SMART LRR_typ_2 401 425 IPR003591 -
Sto5g0974 962 SMART LRR_typ_2 497 524 IPR003591 -
Sto5g0974 962 SMART LRR_typ_2 210 234 IPR003591 -
Sto5g0974 962 SMART LRR_typ_2 329 353 IPR003591 -
Sto5g0974 962 SMART LRR_typ_2 162 186 IPR003591 -
Sto5g0974 962 Gene3D Phosphorylase Kinase; domain 1 628 709 - -
Sto5g0974 962 SUPERFAMILY RNI-like 203 536 - -
Sto5g0974 962 SMART serkin_6 647 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0974 Sto-Chr5 6551651 6558347 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0974 92 896 Receptor kinase-like Gene Family AT5G07180 66.626 0.0 1097
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Sto5g0974 Pkinase 1.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0974 K20718 - gmx:100782307 1651.34