Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0968 ATGGAGACGCTTGGACACAGACAAGCCCATCAATTTGCGCAACTGTTGAGGAGTAGCAGGCAACATGAGTTCTTCGATCTTATCGAGGTTTGCCCTTCCCAACAAGGCCACGTTGTCGCTTCTTCTCATGTTAACCCCAGAACTCGCAATTACCACTTTCTCCACTCTTTCCCCTACCATTCTCGCTATATGGTAAGCCACGAATCCCCCGTAACTTGTGCCCATCACATGGAATCTCTTCACTTCCAACTTGTCCATAACTTTCGCCACCGACGCCGCCTGAAACACCTCGCTCCGGTCGCCGGACGTCGTGGTGGACGCTCCGAAGAACACCAGGTCGGGAACGTAGATGTTGAAGTGAGGGGCCAAGAATTGGACTTGTTGTCGCCATTGCCAGATCGCCATGGGCCCAAACCCATGAGTCCAAAGAAGATTACTTGGAAGTCTATCACCTTGGTGTTAAGTTGCTACAAGAGTAATTACCCCTTAGAGGAAAAACAGCGTTTGAAACAAGGTTCATTCCAGAGGCTATGCCTCTCGGACATAAGCAACTCCAGCTCATGTCAGGCCATTGATGATCTCTCAGTTTCTCTGGTGGGCTCAAAACTTCACATATTCACACTAGAGGAGCTTAGAGAGGCTACACATAATTTCTCATGGAGTAATCTGCTTGGTGAAGGTGGGTTTGGACCGGTGCACAAGGGCTTTTTTTATGACAAACTTAGGCCTGGATTGAAGGCTCAGCCTGTAGCTGTCAAACGCCTCGACTTGGACGGCTTGCAAGGTCACAGGGAGTGGCTGGCGGAGATTATCTTCCTTGGACAGCTGAGGCATCCACATCTTGTTAAGTTAATTGGGTACTGTTATGAGGAGGAACACAGACTTTTGGTATATGAATACATGCCAAGAGGCAGCTTGGAGAATCAACTCTTCAGAAGGTACTCTGCTGCGTTGCCCTGGTCAACCAGGATGAAAATTGCATTAGGTGCAGCTAAGGGTCTAGCCTTCCTTCACGAAGTTGATAAGCCAGTAATATACAGAGATTTCAAGGCTTCAAACATCTTACTAGACTCGGATTACACAGCGAAACTTTCAGATTTCGGGCTGGCGAAGGATGGGCCCGAAGGGGAAGACACGCATGTGACGACACGTGTAATGGGGACACAAGGCTATGCTGCTCCTGAGTACGTGATGACGGGTCACCTTACGACGAAGAGCGATGTGTATAGCTACGGAGTGGTTCTGCTGGAATTGCTGACGGGGAAACGAGTGGTGGATAACAAGAGGCCAAGTAGAGAGCAGAGCTTGGTGGAGTGGGCGAGGCCTATGTTGAGGGATCACAGGAAGTTGTGTAGGATCATAGACCCTAGACTTGAAGGACAATTCCCTGCTAGAGGAGCTCACAAAGTGGCTGCTTTGGCTTACAAATGCTTGAGTCACCACCCAAATCCAAGGCCCACTATGACTGATGTGGTCACCGTATTGGAGTCACTTCAGGACTTTGACGATGTTTACATGGGGTCATTTGTGTATGTTGCTGTGACTGAAAGTACTGGAGACACATAA 1566 0.4898 METLGHRQAHQFAQLLRSSRQHEFFDLIEVCPSQQGHVVASSHVNPRTRNYHFLHSFPYHSRYMVSHESPVTCAHHMESLHFQLVHNFRHRRRLKHLAPVAGRRGGRSEEHQVGNVDVEVRGQELDLLSPLPDRHGPKPMSPKKITWKSITLVLSCYKSNYPLEEKQRLKQGSFQRLCLSDISNSSSCQAIDDLSVSLVGSKLHIFTLEELREATHNFSWSNLLGEGGFGPVHKGFFYDKLRPGLKAQPVAVKRLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEEEHRLLVYEYMPRGSLENQLFRRYSAALPWSTRMKIALGAAKGLAFLHEVDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEDTHVTTRVMGTQGYAAPEYVMTGHLTTKSDVYSYGVVLLELLTGKRVVDNKRPSREQSLVEWARPMLRDHRKLCRIIDPRLEGQFPARGAHKVAALAYKCLSHHPNPRPTMTDVVTVLESLQDFDDVYMGSFVYVAVTESTGDT 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0968 521 PANTHER KINASE 1B 157 518 - -
Sto5g0968 521 PANTHER OS01G0588500 PROTEIN-RELATED 157 518 - -
Sto5g0968 521 ProSiteProfiles Protein kinase domain profile. 218 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0968 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 344 356 IPR008271 GO:0004672|GO:0006468
Sto5g0968 521 CDD STKc_IRAK 224 498 - -
Sto5g0968 521 Gene3D Phosphorylase Kinase; domain 1 180 300 - -
Sto5g0968 521 SUPERFAMILY Protein kinase-like (PK-like) 195 497 IPR011009 -
Sto5g0968 521 Gene3D Transferase(Phosphotransferase) domain 1 301 508 - -
Sto5g0968 521 Pfam Protein tyrosine and serine/threonine kinase 221 494 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0968 Sto-Chr5 6516383 6522543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0968 204 495 Glycoside Hydrolase AT3G07070 54.237 1.56e-103 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto5g0968 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0968 - - gmx:100802636 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0968 5 6516383 6522543 Sto5g0968 5 6516383 6522543 ECH
Sto3g1033 3 7120384 7122358 Sto5g0968 5 6516383 6522543 ECH
Sto9g0092 9 813917 820196 Sto5g0968 5 6516383 6522543 ECH
Sto1g0508 1 4673970 4682833 Sto5g0968 5 6516383 6522543 ECH