Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto5g0962 | ATGGCTACTAGTGATCATCAGAATCATCAGAGTGATCTGATCGGAACTAGTAGCCATGATGATCATCAATCTTGTTCGAACAAGTACAAAGGCGTGAGGAAGCGCAAATGGGGGAAATGGGTGTCTGAAATCCGGCTTCCCAATAGCCGAGAGCGCATTTGGTTAGGGTCTTACGATAGCGCAGAGAAGGCGGCTCGGGCCTTCGATGCGGCCCTTTACTGTCTACGTGGACCTCGGGCCCATTTCAATTTCCCTGATACACCTTCCGAGTTCGATATCATGAATCTTCATCCTCATTCTCAACACTCTCTTTCTCCCCATCAAATCCAAGACCTTGCTGCTAGGTTTGCCAACCAGTTTCAACCCCATGAGATTAATGATGAGCACCAGCAACAACAGCAACTACCATTATTACCAACTGCAGTTGATCCTTCTCCCTCTGAATCCGATAGGGTTACGGAGACCACCGACACTACTGGAACTGGAACTGGTTATAATATGTACGACTGGTCGTTTTTGAACTCGTTGGACTCCAGTATTGACGACGTCAATTTTAATTACAGTAATCTGCACATTAATGATACCGATGCTCTCTACTGTGGAGGGATAGAGCTAGACAAGATGCACTCTGGGGAGTTGTATCACACTCCTAATTTTCTCATGGATCACTCTGATAATCAAGAATTAGTGTGTCTGGAATCGATCTCTATGGGTGCTTGGGAGTGTGAAAATGGAGGGAAAGGAAGGAACTAA | 753 | 0.4582 | MATSDHQNHQSDLIGTSSHDDHQSCSNKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALYCLRGPRAHFNFPDTPSEFDIMNLHPHSQHSLSPHQIQDLAARFANQFQPHEINDEHQQQQQLPLLPTAVDPSPSESDRVTETTDTTGTGTGYNMYDWSFLNSLDSSIDDVNFNYSNLHINDTDALYCGGIELDKMHSGELYHTPNFLMDHSDNQELVCLESISMGAWECENGGKGRN | 250 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto5g0962 | 250 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 | 14 | 194 | - | - | |
Sto5g0962 | 250 | SMART | rav1_2 | 28 | 91 | IPR001471 | GO:0003700|GO:0006355 | |
Sto5g0962 | 250 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 14 | 194 | - | - | |
Sto5g0962 | 250 | SUPERFAMILY | DNA-binding domain | 28 | 86 | IPR016177 | GO:0003677 | |
Sto5g0962 | 250 | CDD | AP2 | 28 | 87 | IPR001471 | GO:0003700|GO:0006355 | |
Sto5g0962 | 250 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Sto5g0962 | 250 | Pfam | AP2 domain | 28 | 77 | IPR001471 | GO:0003700|GO:0006355 | |
Sto5g0962 | 250 | Gene3D | AP2/ERF domain | 27 | 86 | IPR036955 | GO:0003700|GO:0006355 | |
Sto5g0962 | 250 | PRINTS | Ethylene responsive element binding protein signature | 29 | 40 | IPR001471 | GO:0003700|GO:0006355 | |
Sto5g0962 | 250 | PRINTS | Ethylene responsive element binding protein signature | 51 | 67 | IPR001471 | GO:0003700|GO:0006355 | |
Sto5g0962 | 250 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Sto5g0962 | 250 | MobiDBLite | consensus disorder prediction | 139 | 160 | - | - | |
Sto5g0962 | 250 | ProSiteProfiles | AP2/ERF domain profile. | 28 | 85 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto5g0962 | Sto-Chr5 | 6473385 | 6475688 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto5g0962 | 22 | 224 | AP2-EREBP Transcription Factor Family | AT1G74930 | 44.660 | 5.13e-43 | 143 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Sto5g0962 | AP2 | 2e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto5g0962 | - | - | mtr:MTR_3g105510 | 160.229 |