Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0953 ATGGAGCATGACTCTATGGAGGACATGGACATTGAAGTCCTTCCTTCCATGTGGCCCGAAGACATTGGAAATGATGTTGGGAAACAATTTAACATAGAGAAGCCTGGAAGTGACCAAGACATGTTAGAGGAAGTCACAATAATAGAGGAGCCAACAATAGCGGATTTCAAGCGTCTCATGGAGCTCACAAATTACACAGACAAAGGGTCATCTCAGTTGACTTACCTCATGAAACACTGGGAATACAAGCAGGCTAATGCTGTGCGTCTTCTCAGAGAAGAACTTGATAACCTAAGTAAACAAAGGCAGGAAGTTGAGCTGAGGAAGTTAAAGATACTAGAAGAGCATCGGTTTGAAGAAGAGAGATATGGTGGTGATAAACGACCCGTTTCAATCTTGGATGAGGTTTATGATATATGGGAAGATACACCACGCAGGAAAAGTGATGTTGTTGTTCAGAACAAGAGAATTGAAATAGATGCTGAGTATGATACTGTGGTGTATTGGAAGCAGAGGGCTCTGCATTTGGAGAAACTGTTGGAGGCAAGTATAGAGAGAGAGCATACACTAATGGAGAAGATGGAGGAAAGTATAAAGAATCTTGAAAGACAGTCCTCGCCTGTGGAAGAATTGTCTCAGATTCTGAAAAGGGCAGATAATTTCTTGCATTTTATTCTGCAGAATGCACCTGTTGTGATTGGCCATCAGGACAAAGAGCTGCGTTATCGCTTTATTTATAATCATTTCCCAAGTTTGCAAGAGGAGGACATTATAGGAAGAACTGATGTTGAAATTTTCACAGGAGCTGGTGTTAGGGAATCTCAAGATTTCAAGAGAGAAGTTATGGAGAAAGGATTGCCTGCAAAGAGGGAAATTACTTTTGAGACAGAGCTGTTTGGATCAAAAACATTCTTAATTTATGTAGAACCTGTCTTTAGTAAAGCAGGGGAGACAATAGGTGTAAATTACATGGGAATGGATGTGACAGATCAGgtgagaaaaagagaaaggatgGCAAAGCTTAGAGAAGAGATTGCAGTTCAAAAAGCCAAAGAAACAGAACTAAATAAAACCATTCACATTACAGAGGAGACTATGAGAGCAAAACAAATGTTGGCAACTATGTCTCATGAGATAAGATCTCCACTCTCGGGGGTTGTTAGCATGGCTGAAATTCTCTCTACCACAAAACTTGATAAGGAGCAAAGACAACTCTTGGATGTCATGCTTTCCTCTGGAGATTTGGTTCTTCAACTTATAAATGACATACTAGATCTCTCCAAGGTTGAATCGGGAGTAATGAAATTGGAAGCTACCAAATTCAGGCCAAGAGAGGTAGTAAAGCATGTGCTTCAGACAGCTGCAGCATCATTGCAGAAGATATTAACCTTAGAAGGTCACGTGGCAGATGATGTACCAGTTGAGGTGAGAACTTATGTCATTGGAGACGTTTTAAGGATTCGGCAAATTGTCACAAATCTAATCAGCAATGCAATCAAGTTTACGCATGAAGGCAAAGTGGGGATAAATCTTTACGTTGTAGCAGAGCCAAATTTTGCAAAGTCAGCAAATGGAGTGACAGAAGAGAAATATCACTCAACATCTCAAAGTGGAAGTGATGAATGTAGATCTCCGGTTAAAAGCGAATGCTCAAGGAATGGAGATACTGAGGAACGACCTCATCCAACTGAAACAACAGTGTGGATACGATGTGATGTATATGACACAGGAATTGGAATACCAGAAAATGCAATGCATACTCTATTCAAAAGGTACATGCAAGTCAGTGCAGACCACGCTAGAAAGTATGGTGGCACAGGGCTAGGACTAGCAATATGCAAACAACtgGTTGAGTTAATGGGTGGTCGTTTAACGGTGTCTAGCAAAGAACACTGTGGTTCAACATTTACATTCATTCTTCCGTACAAGGTTTCCACTGTTTGTGTTCATTCCGATGACTCCGACGAGCTCTCAGATGTGGATAATAACGATGCTGCGTCCGATGATGCCACCGAGGGTTTCTTCCAATTCCAACCTCGCACTTTGGGTTCTCTCTTCTCCTCCAACGGATCTACCAGAACCTCACAGTTATTACCTCATAAAATGGGGTTCACATCCTCACGAAAATTAAATGGCTTTCCCCAGAATCCTTACTCATTCCAATTTAACACCGTCAGATCCAATGGGACAACTTCATTCGAAGATGCATCCTCGGTGACTGTAATTGACGCGCCAGAGATGTCTGAATCAGTAAGTTCGTGGAGTCAAAACCCAGAAACAGAGAACGAAAATGTAGGTAACAGAGACCGACAGCATCAAGACAAGACGCATGCTCAGCCCCACCAAAATAAAACTTGTGGGACCCAAGAGAAGGATAATAATAGAACCTCTCAATGTGTTACTGGTAGCAATACATCAGTGGCAACCAAACCCACGTTAGAGCCTAAGATTCTTCTCGTTGAAGATAACAAGATAAATGTCATGGTGACACAGTCAATGATGAAGCAGTTAGGTCACAGCATAGATGTGGTGAATAATGGAGCGGAAGCTGTGCGTGCAGTTCAGCGCCGGAGTTATGCCCTCATTCTGATGGATGTGTACATGCCAATTATGAATGGTCTTCAAGCAACAAAATTGATTCGATCTTTTGAGGAAACTGGCAATTGGGATGCTGCAACAAATGCTGGAATCGAGCCAAGTCTATCAACTTCAGATTTGCAGAAAGTTCAATGTTCTAGACCTTGTACAAAGCGAATGCCCATTATCGCAACAGCAAATGCCTTGTCAGAGAGTGCAGAAGAGTGTTACGCAAACGGCATGGACTCATTTGTGTCTAAACCTGTGACTTTCCAAAAGTTGAAAGAGTGTCTTGAACAATACCTACGGTGA 2889 0.4157 MEHDSMEDMDIEVLPSMWPEDIGNDVGKQFNIEKPGSDQDMLEEVTIIEEPTIADFKRLMELTNYTDKGSSQLTYLMKHWEYKQANAVRLLREELDNLSKQRQEVELRKLKILEEHRFEEERYGGDKRPVSILDEVYDIWEDTPRRKSDVVVQNKRIEIDAEYDTVVYWKQRALHLEKLLEASIEREHTLMEKMEESIKNLERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLQEEDIIGRTDVEIFTGAGVRESQDFKREVMEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGVNYMGMDVTDQVRKRERMAKLREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDKEQRQLLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKILTLEGHVADDVPVEVRTYVIGDVLRIRQIVTNLISNAIKFTHEGKVGINLYVVAEPNFAKSANGVTEEKYHSTSQSGSDECRSPVKSECSRNGDTEERPHPTETTVWIRCDVYDTGIGIPENAMHTLFKRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHCGSTFTFILPYKVSTVCVHSDDSDELSDVDNNDAASDDATEGFFQFQPRTLGSLFSSNGSTRTSQLLPHKMGFTSSRKLNGFPQNPYSFQFNTVRSNGTTSFEDASSVTVIDAPEMSESVSSWSQNPETENENVGNRDRQHQDKTHAQPHQNKTCGTQEKDNNRTSQCVTGSNTSVATKPTLEPKILLVEDNKINVMVTQSMMKQLGHSIDVVNNGAEAVRAVQRRSYALILMDVYMPIMNGLQATKLIRSFEETGNWDAATNAGIEPSLSTSDLQKVQCSRPCTKRMPIIATANALSESAEECYANGMDSFVSKPVTFQKLKECLEQYLR 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0953 962 CDD HisKA 366 428 IPR003661 GO:0000155|GO:0007165
Sto5g0953 962 MobiDBLite consensus disorder prediction 763 779 - -
Sto5g0953 962 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 366 432 IPR036097 GO:0000155|GO:0007165
Sto5g0953 962 Coils Coil 338 358 - -
Sto5g0953 962 MobiDBLite consensus disorder prediction 545 561 - -
Sto5g0953 962 PRINTS Bacterial sensor protein C-terminal signature 569 583 IPR004358 GO:0016310|GO:0016772
Sto5g0953 962 PRINTS Bacterial sensor protein C-terminal signature 604 622 IPR004358 GO:0016310|GO:0016772
Sto5g0953 962 PRINTS Bacterial sensor protein C-terminal signature 628 641 IPR004358 GO:0016310|GO:0016772
Sto5g0953 962 SMART HisKA_10 367 432 IPR003661 GO:0000155|GO:0007165
Sto5g0953 962 MobiDBLite consensus disorder prediction 747 807 - -
Sto5g0953 962 CDD REC_hyHK_CKI1_RcsC-like 817 957 - -
Sto5g0953 962 SUPERFAMILY CheY-like 815 962 IPR011006 -
Sto5g0953 962 ProSiteProfiles Histidine kinase domain profile. 374 644 IPR005467 -
Sto5g0953 962 MobiDBLite consensus disorder prediction 780 807 - -
Sto5g0953 962 Coils Coil 184 211 - -
Sto5g0953 962 MobiDBLite consensus disorder prediction 747 762 - -
Sto5g0953 962 Gene3D - 355 432 - -
Sto5g0953 962 SMART HKATPase_4 482 644 IPR003594 -
Sto5g0953 962 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 1 528 - -
Sto5g0953 962 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 553 961 - -
Sto5g0953 962 CDD HATPase_EvgS-ArcB-TorS-like 487 641 - -
Sto5g0953 962 Pfam His Kinase A (phospho-acceptor) domain 369 432 IPR003661 GO:0000155|GO:0007165
Sto5g0953 962 Coils Coil 88 115 - -
Sto5g0953 962 MobiDBLite consensus disorder prediction 527 544 - -
Sto5g0953 962 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 421 642 IPR036890 -
Sto5g0953 962 Gene3D PAS domain 209 344 - -
Sto5g0953 962 ProSiteProfiles Response regulatory domain profile. 816 961 IPR001789 GO:0000160
Sto5g0953 962 Pfam Response regulator receiver domain 817 885 IPR001789 GO:0000160
Sto5g0953 962 Gene3D - 433 648 IPR036890 -
Sto5g0953 962 SMART REC_2 815 957 IPR001789 GO:0000160
Sto5g0953 962 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 642 IPR003594 -
Sto5g0953 962 Gene3D - 810 962 - -
Sto5g0953 962 MobiDBLite consensus disorder prediction 526 561 - -
Sto5g0953 962 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 1 528 - -
Sto5g0953 962 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 553 961 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0953 Sto-Chr5 6414912 6418998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0953 1 961 Histidine Kinase Gene Family AT5G10720 61.443 0.0 1137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto5g0953 HATPase_c 1.7e-27 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0953 - - gmx:100819520 1475.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0953 5 6414912 6418998 Sto5g0953 5 6414912 6418998 ECH