Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0951 ATGGAGATGATGAAGAAGCAGCGTGGTGATGTTGGAGCTAGATCCCTCGTCTTGTTCTGCTCTCTAATCCTAAGATTATACCTAGTGTGCCCACAAAAAGTGAATGTTGGAATAGTGCTTGATCTTTCTGAAACAACTTCCAAGATTGGATTGAGCTGCATCAACATGTCTCTCTCTGACTTTTATGCCTCTCATTCTCATTACTccacttctcttctcttcagcGTAAGGGACTCTCACTCACATGTCGTTACTGCAGCTGCTCAAGCTTTAGATCTGATAAAAACGGAGCAAGTAGAAGCCATAATAGGGCCATCAACATCAATGGAAGCCAACTTCGTGATCAATCTGGGAGACAAAGCTCACGTGCCCATCATAACGTTTACAGCAACAAGTCCTTCTCTTGCATCCCTACGAAGTCCCTATTTTTTTCGAATTGCACAAAGCGATTCAGATCAAGTGAATGCCATCAGTTCAATCGTGGAAGCTTTTGGGTGGAAAGCAGCCGTACCCATTTACGTAGACGACGATTATGGGAAAGGAGTCCTACCCTTCTTAACCAATGCTCTCCAACAAGTCAATGCTCGCATTCCATACCAATCTCCCATTTCTGCTTCAGCTTCTGATACAGACATTCAAGCAGAGCTATACAAGTTGATGACTATGCAAACCAGAGTGTTTGTTGTTCACATGTCAGAAAATCCTGGGACTCGTCTCTTCACCATAGCAAAAGAGATTGGAATGATGGAGAAAGGCTATGTTTGGATTGTAAGCGATGGTTTGGGTAATGTATTAAACTCCTTGGATTCCTCAGTTAAAGAATCAATGCAAGGAGTATTGGGTGTGAGGACCTATGTTCCCCAAACTAAGAGGCTTGAGGATTTCAGAGTTAGATGGAAGAGACAATTCGTACAAGACAATCCAACCCTTGTTGATGCTAATTTGAATGTTTTTGGATTGTGGGCTTATGATGCTGCCACGGCATTAGCTATGAGTGTTGAGAAGGTTGGCACGGACAATCTTGGGTTTAGTATGAGCAATGCTTCAGCCAATCTGACTGATCTTGAAAGTTTTGGAGTTTCAAATAATGGTGAAAAGCTGCGTGAAGCCTTGTCAAACACTAGATTTAGAGGGCTGAGTGGAGAGTTCAGTGTTGTTCATGGGCAATTGCAAGCATCCACATTTGAGATAATCAATGTGAATGGTAATGGAGAGAGGCGGGTAGGAGTTTGGACACAGAAAAATGGACTCACGAAGAATCTGCGTTTGACAAATAGGAGGAATATTCTAGGGCCTATCATATGGCCAGGAGATACCTCCTCTGTTCCAAAAGGTTGGGAGAATCCTAcaaatgggaaaaagatgaaaatagGAGTTCCAGTGAGAACAGGATTTAGTGAATTTGTGAAGGTGTCTCATGATTTAAGCACTAATACAACACAAGTCACTGGGTTCAGCATAGATGTGTTTAAAGCAGTGCTTGAAGTGCTGCCTTATGCCTTACCCTATGAATTTATCCCATTTGCAAAGCCCAATGGTGAGAGTGCTGGTAATTACAACGAACTTGTCAGCCAAGTTTATTATGGGAATTATGACGCTGTGGTTGGAGATACAACAATTACCGCAAACAGGTCGAATTTTGTGGATTTCACCATGCCATACACGGAATCTGGTGGAACTATGATTGTTCCATTCATAGCAAACAAGAAAAAGAGCCCATGGGCTTTCTTGAAGCCATTGACGTGGGATCTATGGGCAACCACATTCTTTTCGTTTGTATttgttgggtttgtggtttgggtgcTTGAACATCGAATCAACGAACAGTTCCGAGGGCCTCCTTCTCATCAGATCGGCACTAGCTTATGGTTTTCATTCTCAATCATGGTCTTTGCACATCGAGAGAAAGTAGTGAGCAACGGTGCTAGATTTGTGGTGATGATGTGGGTTTTCGTACTTCTGATTTTAGTCCAAAGCTACACCGCAAGCTTGACTTCACTCTTAACAGTTGAGCAACTCCATCCAAGTGTTACGGATGTGAATAAGCTAATCAAGAATAGGTTAAACGTGGGGTACCTAGAAGGTTCTTTTGTTTATGGGATCTTGAAGGGCATGGGGTTTCAAGATTTCCAGCTCATCCCTTATAACTCTGCCGAAAACTGCGATGAACTCTTCACACTTGGAACTGCAAAGGGTGGTATTGATGCTGCTTTTGATGAAATGCCCAATGTCAAGCTCATTCTTGGAGCTTATTGCTCCAAATATACCACAGTTTCTGGAGCATCCTTTAAAACTGACGGCTATGGTTATgTATTCCCTAGAGGGTCTCCTCTTGTAGCAGACATATCAAGGGCAATCCTGAACGTGACACAAGGAGAAAAAATGAAGACAATTGAGAATGGGTACTTCAAAAACAGTAATTGCCCAGAGAATGACACCTCTGTTTCTGCAGATAACCTAAGCCTTGAAAGCTTCTGGGGCCTCTTCCTCATTGCAGGGGTTGCTTCCATTTCAGCTCTCTGCTTTTTTGCAGCCACATTCCTATACCAGCACAGGCACATATGGTTGCACCATGATGCTGACATTCCTATGTGGAAACGAATATGTGGGTTGCTCAGAATGTTCGACCAAAAAGACATGAGCTCCCACACTTTTAGAAAAAGACAAGTGgcagataataataataatgcttcGGAGTGTTCCCCTCATAGTGGGACTCAAGGCCCACCAAGTCCGTCTAGTCAAACAGAATCAGATTTCTCATTTCTTGCAGACTATGGAAACCATAATAATAATCCAAATGCTAATGCACCGCAAGACATAGAGATGAACGTAGTGCATAGTACTGTCCCTCCTGCACCCACAAATGATACTACTACACAAGTTGTGATTGTCCCTGCAAATAACTCATAA 2913 0.415 MEMMKKQRGDVGARSLVLFCSLILRLYLVCPQKVNVGIVLDLSETTSKIGLSCINMSLSDFYASHSHYSTSLLFSVRDSHSHVVTAAAQALDLIKTEQVEAIIGPSTSMEANFVINLGDKAHVPIITFTATSPSLASLRSPYFFRIAQSDSDQVNAISSIVEAFGWKAAVPIYVDDDYGKGVLPFLTNALQQVNARIPYQSPISASASDTDIQAELYKLMTMQTRVFVVHMSENPGTRLFTIAKEIGMMEKGYVWIVSDGLGNVLNSLDSSVKESMQGVLGVRTYVPQTKRLEDFRVRWKRQFVQDNPTLVDANLNVFGLWAYDAATALAMSVEKVGTDNLGFSMSNASANLTDLESFGVSNNGEKLREALSNTRFRGLSGEFSVVHGQLQASTFEIINVNGNGERRVGVWTQKNGLTKNLRLTNRRNILGPIIWPGDTSSVPKGWENPTNGKKMKIGVPVRTGFSEFVKVSHDLSTNTTQVTGFSIDVFKAVLEVLPYALPYEFIPFAKPNGESAGNYNELVSQVYYGNYDAVVGDTTITANRSNFVDFTMPYTESGGTMIVPFIANKKKSPWAFLKPLTWDLWATTFFSFVFVGFVVWVLEHRINEQFRGPPSHQIGTSLWFSFSIMVFAHREKVVSNGARFVVMMWVFVLLILVQSYTASLTSLLTVEQLHPSVTDVNKLIKNRLNVGYLEGSFVYGILKGMGFQDFQLIPYNSAENCDELFTLGTAKGGIDAAFDEMPNVKLILGAYCSKYTTVSGASFKTDGYGYVFPRGSPLVADISRAILNVTQGEKMKTIENGYFKNSNCPENDTSVSADNLSLESFWGLFLIAGVASISALCFFAATFLYQHRHIWLHHDADIPMWKRICGLLRMFDQKDMSSHTFRKRQVADNNNNASECSPHSGTQGPPSPSSQTESDFSFLADYGNHNNNPNANAPQDIEMNVVHSTVPPAPTNDTTTQVVIVPANNS 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0951 970 SUPERFAMILY Periplasmic binding protein-like I 29 437 IPR028082 -
Sto5g0951 970 Pfam Receptor family ligand binding region 53 403 IPR001828 -
Sto5g0951 970 Gene3D - 572 701 - -
Sto5g0951 970 Gene3D - 729 810 - -
Sto5g0951 970 PANTHER GLUTAMATE RECEPTOR 2.9 34 900 - -
Sto5g0951 970 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 34 900 - -
Sto5g0951 970 SMART GluR_14 456 805 IPR001320 GO:0015276|GO:0016020
Sto5g0951 970 Pfam Ligand-gated ion channel 805 835 IPR001320 GO:0015276|GO:0016020
Sto5g0951 970 Pfam Bacterial extracellular solute-binding proteins, family 3 479 804 IPR001638 -
Sto5g0951 970 MobiDBLite consensus disorder prediction 887 938 - -
Sto5g0951 970 CDD PBP1_GABAb_receptor_plant 35 421 IPR044440 -
Sto5g0951 970 SUPERFAMILY Periplasmic binding protein-like II 430 806 - -
Sto5g0951 970 MobiDBLite consensus disorder prediction 884 938 - -
Sto5g0951 970 CDD GluR_Plant 453 803 - -
Sto5g0951 970 Gene3D - 464 571 - -
Sto5g0951 970 Gene3D - 357 458 - -
Sto5g0951 970 PIRSF IGluLR_plant 11 937 IPR017103 -
Sto5g0951 970 Gene3D - 149 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0951 Sto-Chr5 6400630 6404187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0951 33 914 Ion Channels AT2G29120 52.472 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0951 K05387 - tcc:18587654 1124.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0951 5 6400630 6404187 Sto5g0951 5 6400630 6404187 ECH