Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0948 ATGAGTAAGCTTCAGAGTGATGCTCTTAGAGAAGCTATCTCAGGAATCATGGCTGATTCCAAGGAAAAAAACCGGAAGTTTGTGGAGACCATTGAGCTCCAGATTGGGCTGAAAAATTATGATCCCCAAAAGGATAAGCGGTTTAGCGGTTCTGTGAAACTGCCCCACATCCCTCGCCCCAAGATGAAAATATGCATGTTGGGAGATGCTCAGCACGTTGAAgagGCTGAGAAGATAGGGCTGGATTATATGGACGTGGAAGGGTTGAAAAAGCTAAACAAGAATAAGAAGCTGGTTAAGAAACTTGCCAAAAAATACCATGCCTTTTTAGCTTCTGAAGCAGTCATTAAGCAGATTCCCCGTCTTTTGGGTCCTGGGAAATTCCCCACACTTGTTACTCACCAAGAATCTCTTGAGTCTAAGGTTAATGAGACCAAGGCCATGGTAAAATTTCAGCTAAAGAAGGTGCTTTGCATGGGTGTTGCTGTGGGGAATGTTAGTATGGAGGAAAAACAAATCTTCCAAAATGTACAATTGAGCGTTAACTTCCTTGTTTCCTTGTTGAAGAAGAACTGGCAGAATGTGAGGTGCTTGTATCTGAAGAGCACGATGGGGAAATCATACCGCGTCTTTTGA 636 0.4292 MSKLQSDALREAISGIMADSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0948 211 CDD Ribosomal_L1 9 210 IPR028364 -
Sto5g0948 211 Gene3D - 131 209 - -
Sto5g0948 211 Gene3D - 1 119 - -
Sto5g0948 211 PANTHER 60S RIBOSOMAL PROTEIN L10A-3 2 209 - -
Sto5g0948 211 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 2 209 - -
Sto5g0948 211 SUPERFAMILY Ribosomal protein L1 21 211 IPR023674 -
Sto5g0948 211 PIRSF RPL1p_RPL1a_RPL10e_RPL1o 1 211 IPR002143 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Sto5g0948 211 Pfam Ribosomal protein L1p/L10e family 22 205 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0948 Sto-Chr5 6373301 6375239 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0948 1 211 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 86.574 1.61e-122 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0948 K02865 - gmx:100527698 386.726