Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0945 ATGGGATATCTCAATTCAGTTTTGTCCTCTTCAAGCCAGGTTCATGCTGCTGAAGAAGCACCTGCAAGCGGCGGGGGCCTCAGTCAGAACAGCAAGTTCAGCTATGGATATGCTAGCTCTCCTGGTAAAAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGATGGTGTTGATGGTGAAATTGTTGGCCTTTTTGGAGTTTTTGATGGTCATGGTGGTGTTCGGGCTGCTGAGTACGTCAAGCAAAACCTCTTCAAGAATTTGATCACACACCCCAAATTTATTTCTGACACCAAATCAGCTATAGCTGATGCATATAACCATACGGACTCTGAATTTCTGAAATCAGAAAATAGTCAAAATAGGGATGCTGGATCTACTGCTTCCACTGCCATCCTAGTCGGTGATCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGTAAGGCTATTGCTGTTTCTCGAGATCACAAGCCAGACCAAACTGATGAGAGGCAAAGGATTGAAGATGCAGGGGGATTTGTGATGTGGGCAGGAACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAAAGTTGACAGCTCCCTTGAGTTTCTTATATTGGCTAGTGATGGGCTATGGGATGTTGTCTCAAATGAGGAAGCAGTTGGAATGGTGAAACCAATTGAGAATGCAGAGGAGGCAGCAAAGAGACTGACACAGGAAGCATATCAGAGGGGAAGTGCAGACAATATCACTTGTGTGGTTGTTCGCTTCTTCAAGAATCAAGCCGCTTCTTCTTATTACCGTAATCTCCAGAGGAAGGTGTGTAATGTTGGAGCAAAGTTGGGAGTTGTGTGTGGAGTCAGTTATTGGGCTTTCCATGTGTATTCTGGGCTTTGCACACTCCATTGTGAAGGAAAAGGTGAAACAAGAGATAGTGTGCCACTGCACATTGTGTCTAAGCGAATACCGAACAGCCTTTTAGCTTAG 1056 0.447 MGYLNSVLSSSSQVHAAEEAPASGGGLSQNSKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGVRAAEYVKQNLFKNLITHPKFISDTKSAIADAYNHTDSEFLKSENSQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGKAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVGMVKPIENAEEAAKRLTQEAYQRGSADNITCVVVRFFKNQAASSYYRNLQRKVCNVGAKLGVVCGVSYWAFHVYSGLCTLHCEGKGETRDSVPLHIVSKRIPNSLLA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0945 351 SMART PP2C_4 24 278 IPR001932 -
Sto5g0945 351 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 292 - -
Sto5g0945 351 Gene3D - 25 287 IPR036457 -
Sto5g0945 351 SMART PP2C_SIG_2 45 280 IPR001932 -
Sto5g0945 351 CDD PP2Cc 33 280 IPR001932 -
Sto5g0945 351 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Sto5g0945 351 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Sto5g0945 351 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Sto5g0945 351 PANTHER ALPHABET, ISOFORM E-RELATED 3 292 - -
Sto5g0945 351 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0945 Sto-Chr5 6351987 6358877 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0945 1 285 PP2C-type Phosphatase Gene Family AT4G31750 91.228 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0945 K17506 - gmx:547661 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0945 5 6351987 6358877 Sto5g0945 5 6351987 6358877 ECH