Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0933 ATGGACGAGCCATATATGCTGAACCCATGCACCTTCGATCAAAACACAAGTGGTGCTACTTTTATGCCTAATTCTTCTCTGTCCTGTCAAATTGACCTCTCCAAAGTTCTACCTCAATGGGTCACTGTCGGATTCTCTGCTGCTACTAGTGTGTATCCTGCACGACATACTATTCATTCTTGGGAATTTAATTTAGCTCTTCTTTTAATTCCTCGGATTCGGTGGCATTGGTGGACACTGGACAGAGAAAATAAGGTTGTAGATGTGGTAGTAGTTGCTGCAGTCGCAATAAGTTCACTGGTTTTTGTGCTTGTGGTAGTGAGTATTTGTTGGTTCATaataaagaagagaagagaaaggtcTAATAGCATTAAAGAATTAGATCTAGACAAATATGCTATACCAAGGAGATTTAATTACCAGGAGTTAGTTCAAGCTACCAATAGATTTGCGGAAGATAGAAAGTTAGGAGGAGGAGGGTCTGGACAAGTTTATAAAGGGTTTCTCAACGATTTAGGACGAACTGTTGCCATCAAGAGAATTTTTGCTGACTTTGAGAATTCAGAGAAAATATTCATCAATGAAGTGAAAATTATAAGCCGTCTCATACATAGAAACTTGGTACAATTCATAGGGTGGTGTCATGAGGAAGGTGAATTCTTGTTGGTTTTTGAATACATGCAGAATGGAAGCCTTGATGCTCATCTCTATGGCAATAGGAGAACATTGGCATGGAATGTGAGGTACAAGATAGCACTAGGCATGGCCACTGCTATCCATTATCTTCATGAAGATGCAGAGCAGTGTGTGCTTCATAGAGACATAAAATCAGCAAACGTTTTGTTGGACACAGATTTCAACACTAAGCTTGGTGATTTTGGGATGGCAAAATTGGTGGATCCAAGATTAAGGACTCTAAGGACAGGGGTGGTAGGAACATCCTAG 945 0.3926 MDEPYMLNPCTFDQNTSGATFMPNSSLSCQIDLSKVLPQWVTVGFSAATSVYPARHTIHSWEFNLALLLIPRIRWHWWTLDRENKVVDVVVVAAVAISSLVFVLVVVSICWFIIKKRRERSNSIKELDLDKYAIPRRFNYQELVQATNRFAEDRKLGGGGSGQVYKGFLNDLGRTVAIKRIFADFENSEKIFINEVKIISRLIHRNLVQFIGWCHEEGEFLLVFEYMQNGSLDAHLYGNRRTLAWNVRYKIALGMATAIHYLHEDAEQCVLHRDIKSANVLLDTDFNTKLGDFGMAKLVDPRLRTLRTGVVGTS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0933 314 ProSiteProfiles Protein kinase domain profile. 150 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0933 314 PANTHER - 27 313 - -
Sto5g0933 314 Gene3D Phosphorylase Kinase; domain 1 135 226 - -
Sto5g0933 314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Sto5g0933 314 SMART serkin_6 150 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0933 314 ProSitePatterns Protein kinases ATP-binding region signature. 156 179 IPR017441 GO:0005524
Sto5g0933 314 PANTHER LECTIN RECEPTOR KINASE 27 313 - -
Sto5g0933 314 ProSitePatterns Legume lectins alpha-chain signature. 37 46 IPR000985 -
Sto5g0933 314 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 171 IPR013320 -
Sto5g0933 314 Gene3D Transferase(Phosphotransferase) domain 1 227 314 - -
Sto5g0933 314 Gene3D - 9 69 - -
Sto5g0933 314 SUPERFAMILY Protein kinase-like (PK-like) 133 313 IPR011009 -
Sto5g0933 314 Pfam Legume lectin domain 23 64 IPR001220 GO:0030246
Sto5g0933 314 Pfam Protein kinase domain 151 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0933 Sto-Chr5 6291545 6292489 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0933 22 313 Receptor kinase-like Gene Family AT5G10530 49.660 2.16e-88 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto5g0933 Pkinase 4.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0933 - - vun:114193012 363.614